[BEGIN]
REFERENCE HAIRPIN
***********************************************************************************
ID : mmu-mir-136
DESCRIPTION : mmu-mir-136 MI0000162 Mus musculus miR-136 stem-loop
CHROMOSOME : 12
SPAN : 110833537 - 110833598
LENGTH : 62
SEQUENCE : GAGGACTCCATTTGTTTTGATGATGGATTCTTAAGCTCCATCATCGTCTCAAATGAGTCTTC
OVERHANG THRESHOLD : 40%
***********************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-136
ACCID : MI0000162
PARENT : mmu-mir-136
CHROMOSOME : 12
START : 110833537
STOP : 110833598
OFFSET : 5..26
SEQUENCE : ACTCCATTTGTTTTGATGATGG
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-136*
ACCID : MI0000162
PARENT : mmu-mir-136
CHROMOSOME : 12
START : 110833537
STOP : 110833598
OFFSET : 40..61
SEQUENCE : ATCATCGTCTCAAATGAGTCTT
STRAND : +
******************************
*** MATURE ***
______________________________________________________________
GAGGACTCCATTTGTTTTGATGATGGATTCTTAAGCTCCATCATCGTCTCAAATGAGTCTTC REF 12 110833537 - 110833598
ACTCCATTTGTTTTGATGATGG MATURE 12 110833542 - 110833624 mmu-miR-136 +
ATCATCGTCTCAAATGAGTCTT MATURESTAR 12 110833577 - 110833659 mmu-miR-136* +
______________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...GACTCCATTTGTTTTGATGATGa..................................... 34688_1_0_0_0_0_0 MATURE 1 33.33 1 33.33 0 0 22
....ACTCCATTTGTTTTGATGAcGGATa.................................. 25347_1_0_0_0_0_0 MATURE 1 33.33 1 33.33 0 0 19C4
GAGGACTCCATTTGTTaTGATG......................................... 25283_1_0_0_0_0_0 MATURE 1 33.33 1 33.33 0 0 16A5
---------- ---------- ----------
3 3 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 3 0 3 100.00%
---------- ---------- ----------
3 0 3
[END]