[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-133a-2
DESCRIPTION : mmu-mir-133a-2 MI0000820 Mus musculus miR-133a-2 stem-loop
CHROMOSOME : 2
SPAN : 180133084 - 180133187
LENGTH : 104
SEQUENCE : AGAAGCCAAATGCTTTGCTGAAGCTGGTAAAATGGAACCAAATCAGCTGTTGGATGGATTTGGTCCCCTTCAACCAGCTGTAGCTGCGCATTGATCACGCCGCA
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-133a
ACCID : MI0000820
PARENT : mmu-mir-133a-2
CHROMOSOME : 2
START : 180133084
STOP : 180133187
OFFSET : 59..80
SEQUENCE : TTTGGTCCCCTTCAACCAGCTG
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-133a*
ACCID : MI0000820
PARENT : mmu-mir-133a-2
CHROMOSOME : 2
START : 180133084
STOP : 180133187
OFFSET : 23..43
SEQUENCE : GCTGGTAAAATGGAACCAAAT
STRAND : +
******************************
*** MATURE ***
________________________________________________________________________________________________________
AGAAGCCAAATGCTTTGCTGAAGCTGGTAAAATGGAACCAAATCAGCTGTTGGATGGATTTGGTCCCCTTCAACCAGCTGTAGCTGCGCATTGATCACGCCGCA REF 2 180133084 - 180133187
TTTGGTCCCCTTCAACCAGCTG MATURE 2 180133143 - 180133267 mmu-miR-133a +
GCTGGTAAAATGGAACCAAAT MATURESTAR 2 180133107 - 180133230 mmu-miR-133a* +
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-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
............................................................TGGTCCCCTTCAACCAaCTGT........................ 15716_1_0_0_0_0_0 MATURE 1 33.33 1 33.33 0 0 16A4
............................................................TGGTCCCCTTCAACCcGCTGT........................ 1914_1_0_0_0_0_0 MATURE 1 33.33 1 33.33 0 0 15C5
............................................................TGGTCCCCTTCAACCAGCTGT........................ 39449_1_0_0_0_0_0 MATURE 1 33.33 1 33.33 0 0 21
---------- ---------- ----------
3 3 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 3 0 3 100.00%
---------- ---------- ----------
3 0 3
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