[BEGIN]
REFERENCE HAIRPIN
***************************************************************************************
ID : mmu-mir-132
DESCRIPTION : mmu-mir-132 MI0000158 Mus musculus miR-132 stem-loop
CHROMOSOME : 11
SPAN : 74987184 - 74987249
LENGTH : 66
SEQUENCE : GGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCC
OVERHANG THRESHOLD : 40%
***************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-132
ACCID : MI0000158
PARENT : mmu-mir-132
CHROMOSOME : 11
START : 74987184
STOP : 74987249
OFFSET : 42..63
SEQUENCE : TAACAGTCTACAGCCATGGTCG
STRAND : +
******************************
*** MATURE ***
__________________________________________________________________
GGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCC REF 11 74987184 - 74987249
TAACAGTCTACAGCCATGGTCG MATURE 11 74987226 - 74987312 mmu-miR-132 +
__________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
........................................GTAACAGTCTACAGCCATGaTCGt... 35222_2_0_0_0_0_13 MATURE 15 17.24 2 16.67 13 17.33 19A3
........................................GTAACAGTCTACAGCCATaGTCGt... 39323_2_0_0_0_0_7 MATURE 9 10.34 2 16.67 7 9.33 18A4
........................................GTAACAGTCTACAGCCATGGTCG.... 26989_2_0_0_0_0_6 MATURE 8 9.20 2 16.67 6 8.00 23
........................................GTAACAGTCTACAGCCATGaTCG.... 26497_1_0_0_0_0_7 MATURE 8 9.20 1 8.33 7 9.33 19A3
........................................GTAACAGTCTACAGCCATaGTCG.... 38868_0_0_0_0_0_7 MATURE 7 8.05 0 0.00 7 9.33 18A4
........................................GTAACAGTCTACAGCCATGGTCGt... 39749_1_0_0_0_0_3 MATURE 4 4.60 1 8.33 3 4.00 23
........................................GTAACAGTCTACAGCCATGGTCGa... 21709_0_0_0_0_0_2 MATURE 2 2.30 0 0.00 2 2.67 23
........................................GTAACAGTCTACAGCCATGGTC..... 19026_0_0_0_0_0_2 MATURE 2 2.30 0 0.00 2 2.67 22
........................................GTAACAGTCTACAGCCATaGTCGa... 28645_0_0_0_0_0_2 MATURE 2 2.30 0 0.00 2 2.67 18A4
........................................GTAACAGTCTACAGCCATGGaCGt... 35206_1_0_0_0_0_1 MATURE 2 2.30 1 8.33 1 1.33 20A2
........................................GTAACAGTCTACAGCCATGGTCt.... 589_0_0_0_0_0_2 MATURE 2 2.30 0 0.00 2 2.67 22
.......................................GGTAACAGTCTACAGCCATGaTCGt... 34408_0_0_0_0_0_2 MATURE 2 2.30 0 0.00 2 2.67 20A3
........................................GTAACAGTCTACAGCCATcGTCGt... 31647_1_0_0_0_0_0 MATURE 1 1.15 1 8.33 0 0.00 18C4
..........................................AACAGTCTACAGCCATGaTCGt... 5816_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 17A3
.......................................GGTAACAGTCTACAGCCAaGGTCG.... 7843_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 18A5
.......................................GGTAACAGTCTACAGCCATa........ 32059_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 19
........................................GTAACAGTCTACAGCCATGGT...... 35336_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 21
........................................GTAACAGTCTACAGCCATtGTCGt... 17374_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 18T4
.......................................GGTAACAGTCTACAGCCATGGTCGt... 34872_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 24
........................................GTAACAGTCTACAGCCATaGTCa.... 28906_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 18A3
........................................GTAACAGTCTACAGCCAaGGTCG.... 19597_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 17A5
........................................GTAACAGTCTACAGCCAgGGTC..... 26061_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 17G4
........................................GTAACAGTCTACAGCCATGaTCGa... 41846_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 19A3
........................................GTAACAGTCTACAGCCATG........ 5474_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 19
........................................GTAACAGTCTACAGCCAgGGTCG.... 14601_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 17G5
........................................GTAACAGTCTACAGCCATGGTCGC... 1699_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 24
........................................GTAACAGTCTACAGCCATGGaCG.... 31417_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 20A2
.......................................GGTAACAGTCTACAGCCATGGTCa.... 34877_1_0_0_0_0_0 MATURE 1 1.15 1 8.33 0 0.00 23
........................................GTAACAGTCTACAGCCATGGTCa.... 16654_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 22
........................................GTAACAGTCTACAGCCATGcTCGa... 44237_1_0_0_0_0_0 MATURE 1 1.15 1 8.33 0 0.00 19C3
.........................................TAACAGTCTACAGCCATaGTCGa... 8116_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 17A4
........................................GTAACAGTCTACAGCCATGcTC..... 31208_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 19C2
.........................................TAACAGTCTACAGCCATGGTCGC... 18051_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 23
........................................GTAACAGTCTACAGCCATGaTCt.... 17113_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 19A2
........................................GTAACAGTCTACAGCCAgGGTt..... 11646_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 17G3
.......................................GGTAACAGTCTACAGCCATGGaCG.... 38736_0_0_0_0_0_1 MATURE 1 1.15 0 0.00 1 1.33 21A2
---------- ---------- ----------
87 12 75
(13.79) (86.21)
*** OTHER ***
__________________________________________________________________
GGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCC REF 11 74987184 - 74987249
TAACAGTCTACAGCCATGGTCG MATURE 11 74987226 - 74987312 mmu-miR-132 +
__________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..GCgACCGTGGCTTTCGATTGTTACT........................................ 35194_1_0_0_0_0_3 OTHER 4 57.14 1 100.00 3 50.00 2G22
....AACCGTGGCTTTCGATTGTTAa......................................... 43313_0_0_0_0_0_1 OTHER 1 14.29 0 0.00 1 16.67 21
.GGCAgCCGTGGCTTTCGATTGTTAC......................................... 13053_0_0_0_0_0_1 OTHER 1 14.29 0 0.00 1 16.67 4G20
....AACCGTGGCTTTCGATTGTTA.......................................... 608_0_0_0_0_0_1 OTHER 1 14.29 0 0.00 1 16.67 21
---------- ---------- ----------
7 1 6
(14.29) (85.71)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 12 75 87 92.55%
OTHER 1 6 7 7.45%
---------- ---------- ----------
13 81 94
[END]