[BEGIN]

REFERENCE HAIRPIN
*******************************************************************************************************
ID                 : mmu-mir-130b
DESCRIPTION        : mmu-mir-130b MI0000408 Mus musculus miR-130b stem-loop
CHROMOSOME         : 16
SPAN               : 17124154 - 17124235
LENGTH             : 82
SEQUENCE           : GGCTTGTTGGACACTCTTTCCCTGTTGCACTACTGTGGGCCTCTGGGAAGCAGTGCAATGATGAAAGGGCATCTGTCGGGCC
OVERHANG THRESHOLD : 40%
*******************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-130b
ACCID      : MI0000408
PARENT     : mmu-mir-130b
CHROMOSOME : 16
START      : 17124154
STOP       : 17124235
OFFSET     : 51..72
SEQUENCE   : CAGTGCAATGATGAAAGGGCAT
STRAND     : -
******************************


TARGET
******************************
CATEGORY   : MATURESTAR
ID         : mmu-miR-130b*
ACCID      : MI0000408
PARENT     : mmu-mir-130b
CHROMOSOME : 16
START      : 17124154
STOP       : 17124235
OFFSET     : 13..34
SEQUENCE   : ACTCTTTCCCTGTTGCACTACT
STRAND     : -
******************************



*** MATURE ***
__________________________________________________________________________________
GGCTTGTTGGACACTCTTTCCCTGTTGCACTACTGTGGGCCTCTGGGAAGCAGTGCAATGATGAAAGGGCATCTGTCGGGCC REF                  16                   17124154 - 17124235  
                                                  CAGTGCAATGATGAAAGGGCAT           MATURE               16                   17124205 - 17124307  mmu-miR-130b         -                    
            ACTCTTTCCCTGTTGCACTACT                                                 MATURESTAR           16                   17124167 - 17124269  mmu-miR-130b*        -                    
__________________________________________________________________________________

                                                                              -SEQ-               -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.................................................GCAGTGCAATGATGAAAGaGCAT...........   29723_15_0_0_0_0_4       MATURE           19        10.50           15        23.81            4         3.39                      18A4   
.................................................GCAGTGCAATGATGAAAGGaCAT...........   44020_10_0_0_0_0_7       MATURE           17         9.39           10        15.87            7         5.93                      19A3   
.................................................GCAGTGCAATGATGAAAaGGCAT...........    32805_9_0_0_0_0_3       MATURE           12         6.63            9        14.29            3         2.54                      17A5   
.................................................GCAGTGCAATGATGAAAGaGCAa...........    37792_2_0_0_0_0_8       MATURE           10         5.52            2         3.17            8         6.78                      18A3   
.................................................GCAGTGCAATGATGAAAGGaCAa...........    38281_0_0_0_0_0_6       MATURE            6         3.31            0         0.00            6         5.08                      19A2   
.................................................GCAGTGCAATGATGAAAGGG..............    39669_1_0_0_0_0_4       MATURE            5         2.76            1         1.59            4         3.39                        20   
.................................................GCAGTGCAATGATGAAAGaGC.............    27893_1_0_0_0_0_4       MATURE            5         2.76            1         1.59            4         3.39                      18A2   
.................................................GCAGTGCAATGATGAAAGGGC.............    23797_1_0_0_0_0_4       MATURE            5         2.76            1         1.59            4         3.39                        21   
.................................................GCAGTGCAATGATGAAAaGGC.............    41598_0_0_0_0_0_5       MATURE            5         2.76            0         0.00            5         4.24                      17A3   
...................................................AGTGCAATGATGAAAGGaCAT...........    30749_0_0_0_0_0_4       MATURE            4         2.21            0         0.00            4         3.39                      17A3   
.................................................GCAGTGCAATGATGAtAGGGC.............       23_0_0_0_0_0_3       MATURE            3         1.66            0         0.00            3         2.54                      15T5   
..................................................CAGTGCAATGATGAAAaGGCAT...........    42984_1_0_0_0_0_2       MATURE            3         1.66            1         1.59            2         1.69                      16A5   
.................................................GCAGTGCAATGATGAAAGaGCATt..........    26678_0_0_0_0_0_3       MATURE            3         1.66            0         0.00            3         2.54                      18A4   
.................................................GCAGTGCAATGATGAAAGaGCA............    21985_0_0_0_0_0_3       MATURE            3         1.66            0         0.00            3         2.54                      18A3   
.................................................GCAGTGCAATGATGAAAGtGCAT...........    22041_2_0_0_0_0_1       MATURE            3         1.66            2         3.17            1         0.85                      18T4   
.................................................GCAGTGCAATGATGAAAGGaCATa..........    22465_0_0_0_0_0_3       MATURE            3         1.66            0         0.00            3         2.54                      19A3   
.................................................GCAGTGCAATGATGAAAGGaCA............    41001_1_0_0_0_0_2       MATURE            3         1.66            1         1.59            2         1.69                      19A2   
.................................................GCAGTGCAATGATGAAAGGGCt............    41189_0_0_0_0_0_2       MATURE            2         1.10            0         0.00            2         1.69                        21   
.................................................GCAGTGCAATGATGAAAaGGCAa...........    33576_0_0_0_0_0_2       MATURE            2         1.10            0         0.00            2         1.69                      17A4   
..................................................CAGTGCAATGATGAAAGaGCAa...........    29837_0_0_0_0_0_2       MATURE            2         1.10            0         0.00            2         1.69                      17A3   
..................................................CAGTGCAATGATGAAAGGGCATCTt........      568_0_0_0_0_0_2       MATURE            2         1.10            0         0.00            2         1.69                        24   
...................................................AGTGCAATGATGAAAGaGCATt..........    36587_2_0_0_0_0_0       MATURE            2         1.10            2         3.17            0         0.00                      16A4   
.................................................GCAGTGCAATGATGAAAGtGCAa...........    28461_0_0_0_0_0_2       MATURE            2         1.10            0         0.00            2         1.69                      18T3   
..................................................CAGTGCAATGATGAAAGGG..............    29577_0_0_0_0_0_2       MATURE            2         1.10            0         0.00            2         1.69                        19   
.................................................GCAGTGCAATGATGAAAtGGCA............     1737_0_0_0_0_0_2       MATURE            2         1.10            0         0.00            2         1.69                      17T4   
.................................................GCAGTGCAATGATGAAAaGGCA............    37843_0_0_0_0_0_2       MATURE            2         1.10            0         0.00            2         1.69                      17A4   
..................................................CAGTGCAATGATGAAAGGaCATg..........    40374_1_0_0_0_0_1       MATURE            2         1.10            1         1.59            1         0.85                      18A3   
..................................................CAGTGCAATGATGAAAGGaCATt..........    15515_0_0_0_0_0_2       MATURE            2         1.10            0         0.00            2         1.69                      18A3   
..................................................CAGTGCAATGATGAAAGGGCA............    27272_1_0_0_0_0_1       MATURE            2         1.10            1         1.59            1         0.85                        21   
...................................................AGTGCAATGATGAAAGtGCATa..........    36561_1_0_0_0_0_1       MATURE            2         1.10            1         1.59            1         0.85                      16T4   
...................................................AGTGCAATGATGAAAGGGCATCT.........    19609_1_0_0_0_0_1       MATURE            2         1.10            1         1.59            1         0.85                        23   
..................................................CAGTGCAATGATGAAAGGGC.............    19832_1_0_0_0_0_1       MATURE            2         1.10            1         1.59            1         0.85                        20   
.................................................GCAGTGCAATGATGAAAGtGC.............    32599_0_0_0_0_0_2       MATURE            2         1.10            0         0.00            2         1.69                      18T2   
.................................................GCAGTGCAATGATGAAAGGaCATC..........     3925_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      19A4   
.................................................GCAGTGCAATGATGAAAGGtCA............    15784_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      19T2   
.................................................GCAGTGCAATGATGAAAGGtCATt..........    15995_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      19T3   
.................................................GCAGTGCAATGATGAAAcGGCA............    17665_1_0_0_0_0_0       MATURE            1         0.55            1         1.59            0         0.00                      17C4   
...................................................AGTGCAATGATGAAAGGGC.............    20172_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                        19   
..................................................CAGTGCAATGATGAAAGGGCAaCTG........    25574_1_0_0_0_0_0       MATURE            1         0.55            1         1.59            0         0.00                      21A3   
..................................................CAGTGCAATGATGAAAGGaCAc...........    12597_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      18A2   
...................................................AGTGCAATGATGAAAGGGCAT...........    42854_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                        21   
...................................................AGTGCAATGATGAAAaGGCAT...........    20682_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      15A5   
..................................................CAGTGCAATGATGAAAGaGCATa..........    11880_1_0_0_0_0_0       MATURE            1         0.55            1         1.59            0         0.00                      17A4   
.................................................GCAGTGCAATGATGAAAtGGCc............    35401_1_0_0_0_0_0       MATURE            1         0.55            1         1.59            0         0.00                      17T3   
.................................................GCAGTGCAATGATGAAAGGtCAT...........    37226_1_0_0_0_0_0       MATURE            1         0.55            1         1.59            0         0.00                      19T3   
...................................................AGTGCAATGATGAAAtGGCAT...........    12772_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      15T5   
.................................................GCAGTGCAATGATGAAAGGGCA............    12561_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                        22   
.................................................GCAGTGCAATGATGAAAGGcCA............     1248_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      19C2   
.................................................GCAGTGCAATGATGAAAGGt..............    15590_1_0_0_0_0_0       MATURE            1         0.55            1         1.59            0         0.00                        19   
...................................................AGTGCAATGATGAAAGGGCATCTt........    17743_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                        23   
.................................................GCAGTGCAATGATGAcAGGGC.............     4324_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      15C5   
.................................................GCAGTGCAATGATGAAAtGGC.............     9758_1_0_0_0_0_0       MATURE            1         0.55            1         1.59            0         0.00                      17T3   
.................................................GCAGTGCAATGATGAAAcGGC.............    39206_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      17C3   
.................................................GCAGTGCAATGATGAAAGtGCAg...........    43066_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      18T3   
...................................................AGTGtAATGATGAAAGGGCAT...........    12480_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      4T16   
...................................................AGTGCAATGATGAAAGtGCATt..........     6360_1_0_0_0_0_0       MATURE            1         0.55            1         1.59            0         0.00                      16T4   
.................................................GCAGTGCAATGATGAAAGcGC.............    33224_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      18C2   
.................................................GCAGTGCAATGATGAAAGcGCAT...........    40266_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      18C4   
.................................................GCAGTGCAATGATGAAAcGGCAg...........    41631_1_0_0_0_0_0       MATURE            1         0.55            1         1.59            0         0.00                      17C4   
.................................................GCAGTGCAATGATGAAAGGGa.............    28553_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                        20   
..................................................CAGTGCAATGATGAAAGGGaATCg.........    20083_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      19A3   
...................................................AGTGCAATGATGAAAGGGCATCc.........    11307_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                        22   
................................................AGCAGTGCAATGATGAAAGaGC.............    21812_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      19A2   
...................................................AGTGCAATGATGAAAGaGCAT...........    30883_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      16A4   
................................................AGCAGTGCAATGATGAAAGaGCAT...........    19951_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      19A4   
................................................AGCAGTGCAATGATGAAAGa...............    27394_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                        19   
..................................................CAGTGCAATGATGAAAGGaCAT...........    30683_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      18A3   
...................................................AGTGCAATGATGAAAGGGCATtTG........    12077_1_0_0_0_0_0       MATURE            1         0.55            1         1.59            0         0.00                      21T2   
....................................................GTGCAATGATGAAAGGGCAaCT.........     2260_1_0_0_0_0_0       MATURE            1         0.55            1         1.59            0         0.00                      19A2   
...................................................AGTGCAATGATGAAAGGGCATa..........     8756_1_0_0_0_0_0       MATURE            1         0.55            1         1.59            0         0.00                        21   
..................................................CAGTGCAATGATGAAAGGGCATCTa........    18586_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                        24   
..................................................CAGTGCAATGATGAAAGGaCAa...........    11939_0_0_0_0_0_1       MATURE            1         0.55            0         0.00            1         0.85                      18A2   
...................................................AGTGCAATGATGAAAGcGCATa..........    23230_1_0_0_0_0_0       MATURE            1         0.55            1         1.59            0         0.00                      16C4   
                                                                                                                        ----------                ----------                ----------   
                                                                                                                               181                        63                       118                                          
                                                                                                                                                     (34.81)                   (65.19)                                       




*** MATURESTAR ***
__________________________________________________________________________________
GGCTTGTTGGACACTCTTTCCCTGTTGCACTACTGTGGGCCTCTGGGAAGCAGTGCAATGATGAAAGGGCATCTGTCGGGCC REF                  16                   17124154 - 17124235  
                                                  CAGTGCAATGATGAAAGGGCAT           MATURE               16                   17124205 - 17124307  mmu-miR-130b         -                    
            ACTCTTTCCCTGTTGCACTACT                                                 MATURESTAR           16                   17124167 - 17124269  mmu-miR-130b*        -                    
__________________________________________________________________________________

                                                                              -SEQ-                   -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
............ACTCTTTCCCTGTTGCACTAC..................................................       4141_34_0_0_0_0_31   MATURESTAR           65        25.00           34        25.76           31        24.22                        21   
............ACTCTTTCCCTGTTGCACTACT.................................................      20809_15_0_0_0_0_26   MATURESTAR           41        15.77           15        11.36           26        20.31                        22   
............ACTCTTTCCCTGTTGCACTA...................................................      12197_12_0_0_0_0_10   MATURESTAR           22         8.46           12         9.09           10         7.81                        20   
............ACTCTTTCCCTGTTGCACTAt..................................................       30436_13_0_0_0_0_7   MATURESTAR           20         7.69           13         9.85            7         5.47                        20   
............ACTCTTTCCCTGTTGCcCTACT.................................................        41514_5_0_0_0_0_4   MATURESTAR            9         3.46            5         3.79            4         3.12                      16C5   
............ACTCTTTCCCTGTTGCACTAa..................................................        29372_4_0_0_0_0_4   MATURESTAR            8         3.08            4         3.03            4         3.12                        20   
............ACTCTTTCCCTGTTGCtCTACT.................................................        24266_4_0_0_0_0_4   MATURESTAR            8         3.08            4         3.03            4         3.12                      16T5   
............ACTCTTTCCCTGTTGCACTACTa................................................        25307_2_0_0_0_0_5   MATURESTAR            7         2.69            2         1.52            5         3.91                        22   
............ACTCTTTCCCTGTTGCACTACTt................................................        38401_6_0_0_0_0_1   MATURESTAR            7         2.69            6         4.55            1         0.78                        22   
............ACTCTTTCCCTGTTGgACTAC..................................................         8106_5_0_0_0_0_1   MATURESTAR            6         2.31            5         3.79            1         0.78                      15G5   
............ACTCTTTCCCTGTTGCACcACT.................................................        41239_1_0_0_0_0_5   MATURESTAR            6         2.31            1         0.76            5         3.91                      18C3   
............ACTCTTTCCCTGTTGaACTAC..................................................        15891_4_0_0_0_0_2   MATURESTAR            6         2.31            4         3.03            2         1.56                      15A5   
............ACTCTTTCCCTGTTGCACTACa.................................................        26968_2_0_0_0_0_3   MATURESTAR            5         1.92            2         1.52            3         2.34                        21   
............ACTCTTTCCCTGTTGCACTACc.................................................        31169_3_0_0_0_0_2   MATURESTAR            5         1.92            3         2.27            2         1.56                        21   
............ACTCTTTCCCTGTTGCgCTAC..................................................        23244_1_0_0_0_0_3   MATURESTAR            4         1.54            1         0.76            3         2.34                      16G4   
............ACTCTTTCCCTGTTGCACTcCT.................................................        11115_1_0_0_0_0_3   MATURESTAR            4         1.54            1         0.76            3         2.34                      19C2   
............ACTCTTTCCCTGTTGCACTgCT.................................................        20190_2_0_0_0_0_1   MATURESTAR            3         1.15            2         1.52            1         0.78                      19G2   
............ACTCTTTCCCTGTTGCACaACT.................................................        43257_1_0_0_0_0_2   MATURESTAR            3         1.15            1         0.76            2         1.56                      18A3   
............ACTCTTTCCCTGTTGCAtTACT.................................................        44238_2_0_0_0_0_1   MATURESTAR            3         1.15            2         1.52            1         0.78                      17T4   
...........CACTCTTTCCCTGTTGCACTAC..................................................         6797_1_0_0_0_0_1   MATURESTAR            2         0.77            1         0.76            1         0.78                        22   
............ACTCTTTCCCTGTTGCgCTACT.................................................         4794_0_0_0_0_0_2   MATURESTAR            2         0.77            0         0.00            2         1.56                      16G5   
............ACTCTTTCCCTGTTGCACaAC..................................................        12081_2_0_0_0_0_0   MATURESTAR            2         0.77            2         1.52            0         0.00                      18A2   
............ACTCTTTCCCTGTTGCtCTAC..................................................        37532_1_0_0_0_0_0   MATURESTAR            1         0.38            1         0.76            0         0.00                      16T4   
............ACTCTTTCCCTGTTGCACTAg..................................................        24531_1_0_0_0_0_0   MATURESTAR            1         0.38            1         0.76            0         0.00                        20   
...........CACTCTTTCCCTGTTGtACTAC..................................................        14031_1_0_0_0_0_0   MATURESTAR            1         0.38            1         0.76            0         0.00                      16T5   
...........CACTCTTTCCCTGTTGaACTAC..................................................        16606_0_0_0_0_0_1   MATURESTAR            1         0.38            0         0.00            1         0.78                      16A5   
............ACTCTTTCCCTGTTGCACcACTGa...............................................        15561_1_0_0_0_0_0   MATURESTAR            1         0.38            1         0.76            0         0.00                      18C4   
............ACTCTTTCCCTGTTGCACTtCT.................................................        34649_0_0_0_0_0_1   MATURESTAR            1         0.38            0         0.00            1         0.78                      19T2   
............ACTCTTTCCCTGTTGCACTg...................................................        12232_1_0_0_0_0_0   MATURESTAR            1         0.38            1         0.76            0         0.00                        19   
............ACTCTTTCCCTGTTGCACTgCTa................................................        26967_0_0_0_0_0_1   MATURESTAR            1         0.38            0         0.00            1         0.78                      19G2   
............ACTCTTTCCCTGTTGCAgTACT.................................................         1090_0_0_0_0_0_1   MATURESTAR            1         0.38            0         0.00            1         0.78                      17G4   
............ACTCTTTCCCTGTTGCAaTACT.................................................        15929_1_0_0_0_0_0   MATURESTAR            1         0.38            1         0.76            0         0.00                      17A4   
............ACTCTTTCCCTGTTGCAaTAC..................................................        37990_1_0_0_0_0_0   MATURESTAR            1         0.38            1         0.76            0         0.00                      17A3   
............ACTCTTTCCCTGTTGCAgTAC..................................................        28550_0_0_0_0_0_1   MATURESTAR            1         0.38            0         0.00            1         0.78                      17G3   
............ACTCTTTCCCTGTTGCAaTACa.................................................         7558_0_0_0_0_0_1   MATURESTAR            1         0.38            0         0.00            1         0.78                      17A3   
............ACTCTTTCCCTGTTGtACTAC..................................................        42280_1_0_0_0_0_0   MATURESTAR            1         0.38            1         0.76            0         0.00                      15T5   
............ACTCTTTCCCTGTTGCcCTACg.................................................        41421_0_0_0_0_0_1   MATURESTAR            1         0.38            0         0.00            1         0.78                      16C4   
............ACTCTTTCCCTGTTGCACcACc.................................................         2308_0_0_0_0_0_1   MATURESTAR            1         0.38            0         0.00            1         0.78                      18C2   
............ACTCTTTCCCTGTTGCACcAC..................................................        14329_0_0_0_0_0_1   MATURESTAR            1         0.38            0         0.00            1         0.78                      18C2   
............ACTCTTTCCCTGTTGCACTt...................................................        15886_1_0_0_0_0_0   MATURESTAR            1         0.38            1         0.76            0         0.00                        19   
............ACTCTTTCCCTGTTGCACcACTa................................................        10444_1_0_0_0_0_0   MATURESTAR            1         0.38            1         0.76            0         0.00                      18C3   
..........ACACTCTTTCCCTGTTGCACTACTa................................................        43807_1_0_0_0_0_0   MATURESTAR            1         0.38            1         0.76            0         0.00                        24   
............ACTCTTTCCCTGcTGCACTAC..................................................        20091_1_0_0_0_0_0   MATURESTAR            1         0.38            1         0.76            0         0.00                      12C8   
............ACTCTTTCCCTGTTGCACTACTG................................................        38338_0_0_0_0_0_1   MATURESTAR            1         0.38            0         0.00            1         0.78                        23   
                                                                                                                            ----------                ----------                ----------   
                                                                                                                                   260                       132                       128                                          
                                                                                                                                                         (50.77)                   (49.23)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE              63             118             181          41.04%
     MATURESTAR             132             128             260          58.96%
                     ----------      ----------      ----------                
                            195             246             441                



[END]
