[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-1306
DESCRIPTION : mmu-mir-1306 MI0009935 Mus musculus miR-1306 stem-loop
CHROMOSOME : 16
SPAN : 18284301 - 18284371
LENGTH : 71
SEQUENCE : GAGGTAATGGACGTTGGCTCTGGTGGTGATGGACAGTCCGAACCTCCTGCCGACGACCCATTCAACTTCTA
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-1306
ACCID : MI0009935
PARENT : mmu-mir-1306
CHROMOSOME : 16
START : 18284301
STOP : 18284371
OFFSET : 11..31
SEQUENCE : ACGTTGGCTCTGGTGGTGATG
STRAND : -
******************************
*** MATURE ***
_______________________________________________________________________
GAGGTAATGGACGTTGGCTCTGGTGGTGATGGACAGTCCGAACCTCCTGCCGACGACCCATTCAACTTCTA REF 16 18284301 - 18284371
ACGTTGGCTCTGGTGGTGATG MATURE 16 18284312 - 18284402 mmu-miR-1306 -
_______________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.........GACGTTGGCTCTGGTGGcGATGt........................................ 20213_0_0_0_0_0_3 MATURE 3 25.00 0 0.00 3 33.33 17C4
.........GACGTTGGCTCTGGTGGTGATGt........................................ 25836_1_0_0_0_0_1 MATURE 2 16.67 1 33.33 1 11.11 22
.........GACGTTGGCTCTGGTGGTaATGt........................................ 28425_0_0_0_0_0_1 MATURE 1 8.33 0 0.00 1 11.11 18A3
.........GACGTTGGCTCTGGTGGaGATGt........................................ 15316_0_0_0_0_0_1 MATURE 1 8.33 0 0.00 1 11.11 17A4
.........GACGTTGGCTCTGGTGGTGATGa........................................ 29299_0_0_0_0_0_1 MATURE 1 8.33 0 0.00 1 11.11 22
.........GACGTTGGCTCTGGTGGTGcTGt........................................ 7285_1_0_0_0_0_0 MATURE 1 8.33 1 33.33 0 0.00 19C2
.......TGGACGTTGGCTCTGGTGGTGATGt........................................ 3909_1_0_0_0_0_0 MATURE 1 8.33 1 33.33 0 0.00 24
.....AATGGACGTTGGCTCTGaTGGT............................................. 36119_0_0_0_0_0_1 MATURE 1 8.33 0 0.00 1 11.11 17A4
........GGACGTTGGCTCTGGTGGTGATGt........................................ 36239_0_0_0_0_0_1 MATURE 1 8.33 0 0.00 1 11.11 23
---------- ---------- ----------
12 3 9
(25.00) (75.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 3 9 12 100.00%
---------- ---------- ----------
3 9 12
[END]