[BEGIN]
REFERENCE HAIRPIN
***************************************************************************************************************
ID : mmu-mir-129-2
DESCRIPTION : mmu-mir-129-2 MI0000585 Mus musculus miR-129-2 stem-loop
CHROMOSOME : 2
SPAN : 94081521 - 94081610
LENGTH : 90
SEQUENCE : TGCCTTTCGCGAATCTTTTTGCGGTCTGGGCTTGCTGTACATAACTCAATAGCCGGAAGCCCTTACCCCAAAAAGCATTCGCGGAGGGCG
OVERHANG THRESHOLD : 40%
***************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-129-3p
ACCID : MI0000585
PARENT : mmu-mir-129-2
CHROMOSOME : 2
START : 94081521
STOP : 94081610
OFFSET : 57..78
SEQUENCE : AAGCCCTTACCCCAAAAAGCAT
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-129-5p
ACCID : MI0000585
PARENT : mmu-mir-129-2
CHROMOSOME : 2
START : 94081521
STOP : 94081610
OFFSET : 15..35
SEQUENCE : CTTTTTGCGGTCTGGGCTTGC
STRAND : -
******************************
*** MATURE-3P ***
__________________________________________________________________________________________
TGCCTTTCGCGAATCTTTTTGCGGTCTGGGCTTGCTGTACATAACTCAATAGCCGGAAGCCCTTACCCCAAAAAGCATTCGCGGAGGGCG REF 2 94081521 - 94081610
AAGCCCTTACCCCAAAAAGCAT MATURE-3P 2 94081578 - 94081688 mmu-miR-129-3p -
CTTTTTGCGGTCTGGGCTTGC MATURE-5P 2 94081536 - 94081645 mmu-miR-129-5p -
__________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.....................................................CGGAAGCCCTTACCCCAAAAAGCAT............. 27750_0_0_0_0_0_1 MATURE-3P 1 50.00 0 0 1 50.00 25
.....................................................CGGAAGCCCTTACCCCAAAAAaCAT............. 20028_0_0_0_0_0_1 MATURE-3P 1 50.00 0 0 1 50.00 21A3
---------- ---------- ----------
2 0 2
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 0 2 2 100.00%
---------- ---------- ----------
0 2 2
[END]