[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-128-2
DESCRIPTION : mmu-mir-128-2 MI0000726 Mus musculus miR-128-2 stem-loop
CHROMOSOME : 9
SPAN : 112021140 - 112021215
LENGTH : 76
SEQUENCE : CAGTGGGAAGGGGGGCCGATGCACTGTAAGAGAGTGAGTAGCAGGTCTCACAGTGAACCGGTCTCTTTCCCTACTG
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-128
ACCID : MI0000726
PARENT : mmu-mir-128-2
CHROMOSOME : 9
START : 112021140
STOP : 112021215
OFFSET : 48..68
SEQUENCE : TCACAGTGAACCGGTCTCTTT
STRAND : -
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*** MATURE ***
____________________________________________________________________________
CAGTGGGAAGGGGGGCCGATGCACTGTAAGAGAGTGAGTAGCAGGTCTCACAGTGAACCGGTCTCTTTCCCTACTG REF 9 112021140 - 112021215
TCACAGTGAACCGGTCTCTTT MATURE 9 112021188 - 112021283 mmu-miR-128 -
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-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...............................................TCACAGTGAACCGGTCTCTTTa........ 38587_3_0_0_0_0_5 MATURE 8 13.79 3 12.00 5 15.15 21
...............................................TCACAGTGAACCGGTCTCcTTt........ 38625_3_0_0_0_0_4 MATURE 7 12.07 3 12.00 4 12.12 18C2
...............................................TCACAGTGAACCGGTCTCaTT......... 1923_4_0_0_0_0_2 MATURE 6 10.34 4 16.00 2 6.06 18A2
...............................................TCACAGTGAACCGGTCTCaTTt........ 24434_1_0_0_0_0_4 MATURE 5 8.62 1 4.00 4 12.12 18A2
...............................................TCACAGTGAACCGGTCgCTTTa........ 19523_0_0_0_0_0_3 MATURE 3 5.17 0 0.00 3 9.09 16G4
................................................CACAGTGAACCGGTCTCTTT......... 4897_0_0_0_0_0_3 MATURE 3 5.17 0 0.00 3 9.09 20
..............................................CTCACAGTGAACCGGTCTCTTTa........ 43551_2_0_0_0_0_1 MATURE 3 5.17 2 8.00 1 3.03 22
...............................................TCACAGTGAACCGGTCTCTTTCt....... 3304_3_0_0_0_0_0 MATURE 3 5.17 3 12.00 0 0.00 22
...........................................GGTgTCACAGTGAACCGGTCTCTTT......... 35419_0_0_0_0_0_3 MATURE 3 5.17 0 0.00 3 9.09 3G21
...............................................TCACAGTGAACCGGTCTCcTTa........ 5303_1_0_0_0_0_1 MATURE 2 3.45 1 4.00 1 3.03 18C2
...............................................TCACAGTGAACCGGTCTCTTTCa....... 19520_2_0_0_0_0_0 MATURE 2 3.45 2 8.00 0 0.00 22
..........................................AGGTgTCACAGTGAACCGGTCTCTc.......... 39736_0_0_0_0_0_1 MATURE 1 1.72 0 0.00 1 3.03 4G19
...............................................TCACAGTGAACCGGTCTCgTTa........ 5742_0_0_0_0_0_1 MATURE 1 1.72 0 0.00 1 3.03 18G2
...............................................TCACAtTGAACCGGTCTCTTTa........ 35155_0_0_0_0_0_1 MATURE 1 1.72 0 0.00 1 3.03 5T15
...............................................TCACAGTGAACCGGTCTCgTTt........ 556_1_0_0_0_0_0 MATURE 1 1.72 1 4.00 0 0.00 18G2
...............................................TCACAGTGAACCGGTCTCaTTg........ 40902_1_0_0_0_0_0 MATURE 1 1.72 1 4.00 0 0.00 18A2
...............................................TCACAGTGAACCGGTCTCTaTCC....... 27024_1_0_0_0_0_0 MATURE 1 1.72 1 4.00 0 0.00 19A3
..........................................AGGTgTCACAGTGAACCGGTCTCTT.......... 18755_0_0_0_0_0_1 MATURE 1 1.72 0 0.00 1 3.03 4G20
...............................................TCACAGTGAACCGGTCTCTTT......... 6921_0_0_0_0_0_1 MATURE 1 1.72 0 0.00 1 3.03 21
...............................................TCACAGTGAACCGGTCTCaTTCt....... 18748_0_0_0_0_0_1 MATURE 1 1.72 0 0.00 1 3.03 18A3
...............................................TCACAGTGAACCGGTCTCcTTCt....... 12562_1_0_0_0_0_0 MATURE 1 1.72 1 4.00 0 0.00 18C3
..............................................CTCACAGTGAACCGGTCTCcTTa........ 41132_1_0_0_0_0_0 MATURE 1 1.72 1 4.00 0 0.00 19C2
...............................................TCACAGTGAACCGGTCTCgTT......... 28376_0_0_0_0_0_1 MATURE 1 1.72 0 0.00 1 3.03 18G2
...............................................TCACAGTGAACCGGTCTCTTTC........ 16404_1_0_0_0_0_0 MATURE 1 1.72 1 4.00 0 0.00 22
---------- ---------- ----------
58 25 33
(43.10) (56.90)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
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MATURE 25 33 58 100.00%
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25 33 58
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