[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-128-1
DESCRIPTION : mmu-mir-128-1 MI0000155 Mus musculus miR-128-1 stem-loop
CHROMOSOME : 1
SPAN : 130098938 - 130099007
LENGTH : 70
SEQUENCE : GTTGGATTCGGGGCCGTAGCACTGTCTGAGAGGTTTACATTTCTCACAGTGAACCGGTCTCTTTTTCAGC
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-128
ACCID : MI0000155
PARENT : mmu-mir-128-1
CHROMOSOME : 1
START : 130098938
STOP : 130099007
OFFSET : 44..64
SEQUENCE : TCACAGTGAACCGGTCTCTTT
STRAND : +
******************************
*** MATURE ***
______________________________________________________________________
GTTGGATTCGGGGCCGTAGCACTGTCTGAGAGGTTTACATTTCTCACAGTGAACCGGTCTCTTTTTCAGC REF 1 130098938 - 130099007
TCACAGTGAACCGGTCTCTTT MATURE 1 130098982 - 130099071 mmu-miR-128 +
______________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........................................TCACAGTGAACCGGTCTCTTTT...... 42684_7_0_0_0_0_9 MATURE 16 59.26 7 58.33 9 60.00 22
...........................................TCACAGTGAACCGGTCTCTTTTa..... 44187_1_0_0_0_0_3 MATURE 4 14.81 1 8.33 3 20.00 22
...........................................TCACAGTGAACCGGTCTCgTTTT..... 23140_2_0_0_0_0_0 MATURE 2 7.41 2 16.67 0 0.00 18G4
........................................TTgTCACAGTGAACCGGTCTCTTTT...... 17814_0_0_0_0_0_1 MATURE 1 3.70 0 0.00 1 6.67 2G22
..........................................CTCACAGTGAACCGGTCTCTTTT...... 42138_1_0_0_0_0_0 MATURE 1 3.70 1 8.33 0 0.00 23
...........................................TCACAGTGAACCGGTCTCcTTTT..... 21436_1_0_0_0_0_0 MATURE 1 3.70 1 8.33 0 0.00 18C4
...........................................TCACAGTGAACCGGTCTCTTTTc..... 30743_0_0_0_0_0_1 MATURE 1 3.70 0 0.00 1 6.67 22
............................................CACAGTGAACCGGTCTCTTTTa..... 34685_0_0_0_0_0_1 MATURE 1 3.70 0 0.00 1 6.67 21
---------- ---------- ----------
27 12 15
(44.44) (55.56)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 12 15 27 100.00%
---------- ---------- ----------
12 15 27
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