[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************
ID : mmu-mir-126
DESCRIPTION : mmu-mir-126 MI0000153 Mus musculus miR-126 stem-loop
CHROMOSOME : 2
SPAN : 26446877 - 26446949
LENGTH : 73
SEQUENCE : TGACAGCACATTATTACTTTTGGTACGCGCTGTGACACTTCAAACTCGTACCGTGAGTAATAATGCGCGGTCA
OVERHANG THRESHOLD : 40%
**********************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-126-3p
ACCID : MI0000153
PARENT : mmu-mir-126
CHROMOSOME : 2
START : 26446877
STOP : 26446949
OFFSET : 46..67
SEQUENCE : TCGTACCGTGAGTAATAATGCG
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-126-5p
ACCID : MI0000153
PARENT : mmu-mir-126
CHROMOSOME : 2
START : 26446877
STOP : 26446949
OFFSET : 9..29
SEQUENCE : CATTATTACTTTTGGTACGCG
STRAND : +
******************************
*** MATURE-3P ***
_________________________________________________________________________
TGACAGCACATTATTACTTTTGGTACGCGCTGTGACACTTCAAACTCGTACCGTGAGTAATAATGCGCGGTCA REF 2 26446877 - 26446949
TCGTACCGTGAGTAATAATGCG MATURE-3P 2 26446923 - 26447016 mmu-miR-126-3p +
CATTATTACTTTTGGTACGCG MATURE-5P 2 26446886 - 26446978 mmu-miR-126-5p +
_________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............................................TCGTACCGTGAGTAATAATGCG....... 31704_1_0_0_0_0_1 MATURE-3P 2 18.18 1 14.29 1 25.00 22
.............................................TCGTACCGTGAGTAATAcTGCGt...... 17575_1_0_0_0_0_0 MATURE-3P 1 9.09 1 14.29 0 0.00 17C4
.............................................TCGTACCGTGAGTAATAATGCa....... 2667_0_0_0_0_0_1 MATURE-3P 1 9.09 0 0.00 1 25.00 21
.............................................TCGTACCGTGAGTAATAATG......... 39198_1_0_0_0_0_0 MATURE-3P 1 9.09 1 14.29 0 0.00 20
.............................................TCGTACCGTGAGTAATAcTGCGC...... 25009_1_0_0_0_0_0 MATURE-3P 1 9.09 1 14.29 0 0.00 17C5
.............................................TCGTACCGTGAGTAATAATGt........ 8051_1_0_0_0_0_0 MATURE-3P 1 9.09 1 14.29 0 0.00 20
.............................................TCGTACCGTGAGTAATgATGCG....... 5077_0_0_0_0_0_1 MATURE-3P 1 9.09 0 0.00 1 25.00 16G5
.............................................TCGTACCGTGAGTAAcAATGC........ 29930_0_0_0_0_0_1 MATURE-3P 1 9.09 0 0.00 1 25.00 15C5
..............................................CGTACCGTGAGTAATAATaCGa...... 38203_1_0_0_0_0_0 MATURE-3P 1 9.09 1 14.29 0 0.00 18A2
............................................CTCGTACCGTGAGTAATAATGCGa...... 11206_1_0_0_0_0_0 MATURE-3P 1 9.09 1 14.29 0 0.00 23
---------- ---------- ----------
11 7 4
(63.64) (36.36)
*** MATURE-5P ***
_________________________________________________________________________
TGACAGCACATTATTACTTTTGGTACGCGCTGTGACACTTCAAACTCGTACCGTGAGTAATAATGCGCGGTCA REF 2 26446877 - 26446949
TCGTACCGTGAGTAATAATGCG MATURE-3P 2 26446923 - 26447016 mmu-miR-126-3p +
CATTATTACTTTTGGTACGCG MATURE-5P 2 26446886 - 26446978 mmu-miR-126-5p +
_________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.....GCgCATTATTACTTTTGGTACGCG............................................. 17362_2_0_0_0_0_4 MATURE-5P 6 66.67 2 40.00 4 100.00 2G21
.....GCgCATTATTACTTTTGGTACGCa............................................. 38128_1_0_0_0_0_0 MATURE-5P 1 11.11 1 20.00 0 0.00 2G20
.....GCgCATTATTACTTTTGGTACGCGg............................................ 27004_1_0_0_0_0_0 MATURE-5P 1 11.11 1 20.00 0 0.00 2G21
........CATTATTACTTTTGGTACGCGCa........................................... 22574_1_0_0_0_0_0 MATURE-5P 1 11.11 1 20.00 0 0.00 22
---------- ---------- ----------
9 5 4
(55.56) (44.44)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 7 4 11 55.00%
MATURE-5P 5 4 9 45.00%
---------- ---------- ----------
12 8 20
[END]