[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-122
DESCRIPTION : mmu-mir-122 MI0000256 Mus musculus miR-122 stem-loop
CHROMOSOME : 18
SPAN : 65408515 - 65408580
LENGTH : 66
SEQUENCE : AGCTGTGGAGTGTGACAATGGTGTTTGTGTCCAAACCATCAAACGCCATTATCACACTAAATAGCT
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-122
ACCID : MI0000256
PARENT : mmu-mir-122
CHROMOSOME : 18
START : 65408515
STOP : 65408580
OFFSET : 6..27
SEQUENCE : TGGAGTGTGACAATGGTGTTTG
STRAND : +
******************************
*** MATURE ***
__________________________________________________________________
AGCTGTGGAGTGTGACAATGGTGTTTGTGTCCAAACCATCAAACGCCATTATCACACTAAATAGCT REF 18 65408515 - 65408580
TGGAGTGTGACAATGGTGTTTG MATURE 18 65408521 - 65408607 mmu-miR-122 +
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-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..CTtTGGAGTGTGACAATGGTGTT.......................................... 24482_1_0_0_0_0_0 MATURE 1 16.67 1 50.00 0 0.00 2T20
.........GTGTGACAATGGTGTTTGTt...................................... 34277_1_0_0_0_0_0 MATURE 1 16.67 1 50.00 0 0.00 19
....GTGGAcTGTGACAATGGTGTTT......................................... 16226_0_0_0_0_0_1 MATURE 1 16.67 0 0.00 1 25.00 5C16
....GTGGAGTGTGACAATGGTcTTTG........................................ 41244_0_0_0_0_0_1 MATURE 1 16.67 0 0.00 1 25.00 18C4
....GTGGAGTGTGACAATGGTGTTT......................................... 1416_0_0_0_0_0_1 MATURE 1 16.67 0 0.00 1 25.00 22
.....TGGAGTGTGACAATGGTGTaTGa....................................... 43330_0_0_0_0_0_1 MATURE 1 16.67 0 0.00 1 25.00 19A2
---------- ---------- ----------
6 2 4
(33.33) (66.67)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
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MATURE 2 4 6 100.00%
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2 4 6
[END]