[BEGIN]
REFERENCE HAIRPIN
************************************************************************************************************************************************
ID : mmu-mir-1195
DESCRIPTION : mmu-mir-1195 MI0006303 Mus musculus miR-1195 stem-loop
CHROMOSOME : 17
SPAN : 71209818 - 71209940
LENGTH : 123
SEQUENCE : TAGAGGCAGGCAGATCTCTGTGAGTTCGAGGCCAGCCTGCTCAACAGAATGAGTTCTAGGGCAGCCAGGAACACACAGAGAAACCCTGTCTCAAGAAGGTAAAAAGTAAAAAAAAAAAAAAAA
OVERHANG THRESHOLD : 40%
************************************************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-1195
ACCID : MI0006303
PARENT : mmu-mir-1195
CHROMOSOME : 17
START : 71209818
STOP : 71209940
OFFSET : 21..43
SEQUENCE : TGAGTTCGAGGCCAGCCTGCTCA
STRAND : -
******************************
*** OTHER ***
___________________________________________________________________________________________________________________________
TAGAGGCAGGCAGATCTCTGTGAGTTCGAGGCCAGCCTGCTCAACAGAATGAGTTCTAGGGCAGCCAGGAACACACAGAGAAACCCTGTCTCAAGAAGGTAAAAAGTAAAAAAAAAAAAAAAA REF 17 71209818 - 71209940
TGAGTTCGAGGCCAGCCTGCTCA MATURE 17 71209839 - 71209983 mmu-miR-1195 -
___________________________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
........................................................................ACACAGAGAAACCCTGTCTC................................ 39480_0_0_0_0_0_3 OTHER 3 42.86 0 0 3 42.86 20
.AGAGGCAGGCAGATCTCTGTGAGT................................................................................................... 19696_0_0_0_0_0_1 OTHER 1 14.29 0 0 1 14.29 24
..........................................................................ACAGAGAAACCCTGTCTCA............................... 23041_0_0_0_0_0_1 OTHER 1 14.29 0 0 1 14.29 19
........................................................................ACACAGAGAAACCCTGTCTCAA.............................. 41345_0_0_0_0_0_1 OTHER 1 14.29 0 0 1 14.29 22
...........................................................................CAGAGAAACCCTGTCTCAA.............................. 29514_0_0_0_0_0_1 OTHER 1 14.29 0 0 1 14.29 19
---------- ---------- ----------
7 0 7
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
OTHER 0 7 7 100.00%
---------- ---------- ----------
0 7 7
[END]