[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-1187
DESCRIPTION : mmu-mir-1187 MI0006285 Mus musculus miR-1187 stem-loop
CHROMOSOME : 5
SPAN : 83227969 - 83228090
LENGTH : 122
SEQUENCE : TCATATAGTATTAAACCGAACTGTTTTCCTTATAGACACAATTTATTTTTACACACACACACACACACATATATATATATATGTGTGTGTGTATGTGTGTAAATAACAATGTTAAAATAGTA
OVERHANG THRESHOLD : 40%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-1187
ACCID : MI0006285
PARENT : mmu-mir-1187
CHROMOSOME : 5
START : 83227969
STOP : 83228090
OFFSET : 80..102
SEQUENCE : TATGTGTGTGTGTATGTGTGTAA
STRAND : -
******************************
*** MATURE ***
__________________________________________________________________________________________________________________________
TCATATAGTATTAAACCGAACTGTTTTCCTTATAGACACAATTTATTTTTACACACACACACACACACATATATATATATATGTGTGTGTGTATGTGTGTAAATAACAATGTTAAAATAGTA REF 5 83227969 - 83228090
TATGTGTGTGTGTATGTGTGTAA MATURE 5 83228049 - 83228192 mmu-miR-1187 -
__________________________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.................................................................................TGTGTGTGTGTATGTGTGT....................... 28643_0_0_0_0_0_1 MATURE 1 100.00 0 0 1 100.00 19
---------- ---------- ----------
1 0 1
(0.00) (100.00)
*** OTHER ***
__________________________________________________________________________________________________________________________
TCATATAGTATTAAACCGAACTGTTTTCCTTATAGACACAATTTATTTTTACACACACACACACACACATATATATATATATGTGTGTGTGTATGTGTGTAAATAACAATGTTAAAATAGTA REF 5 83227969 - 83228090
TATGTGTGTGTGTATGTGTGTAA MATURE 5 83228049 - 83228192 mmu-miR-1187 -
__________________________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...............................................TTTACACACACACACACACAC....................................................... 32224_0_0_0_0_0_4 OTHER 4 50.00 0 0 4 50.00 21
........................................................ACACACACACACATATATATATA............................................ 11746_0_0_0_0_0_1 OTHER 1 12.50 0 0 1 12.50 23
..............................................TTTTACACACACACACACAC......................................................... 11221_0_0_0_0_0_1 OTHER 1 12.50 0 0 1 12.50 20
................................................TTACACACACACACACACAC....................................................... 9505_0_0_0_0_0_1 OTHER 1 12.50 0 0 1 12.50 20
................................................TTACACACACACACACACACATAT................................................... 12595_0_0_0_0_0_1 OTHER 1 12.50 0 0 1 12.50 24
---------- ---------- ----------
8 0 8
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 0 1 1 11.11%
OTHER 0 8 8 88.89%
---------- ---------- ----------
0 9 9
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