[BEGIN]
REFERENCE HAIRPIN
***********************************************************************************************************************************************
ID : mmu-mir-1186
DESCRIPTION : mmu-mir-1186 MI0006284 Mus musculus miR-1186 stem-loop
CHROMOSOME : 8
SPAN : 32213393 - 32213514
LENGTH : 122
SEQUENCE : TCCACCTGTCTCTGCCTCCCGAGTGCTGGAATTAAAGGCATGCACCACCACTGCCCGGCAGGTTCTGTTATTTCTGAGTGTGAGAAATATATGGGGAAAAGTCTTCATGGTGAGTCCAAAGG
OVERHANG THRESHOLD : 40%
***********************************************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-1186
ACCID : MI0006284
PARENT : mmu-mir-1186
CHROMOSOME : 8
START : 32213393
STOP : 32213514
OFFSET : 21..42
SEQUENCE : GAGTGCTGGAATTAAAGGCATG
STRAND : -
******************************
*** MATURE ***
__________________________________________________________________________________________________________________________
TCCACCTGTCTCTGCCTCCCGAGTGCTGGAATTAAAGGCATGCACCACCACTGCCCGGCAGGTTCTGTTATTTCTGAGTGTGAGAAATATATGGGGAAAAGTCTTCATGGTGAGTCCAAAGG REF 8 32213393 - 32213514
GAGTGCTGGAATTAAAGGCATG MATURE 8 32213414 - 32213556 mmu-miR-1186 -
__________________________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
........................GCTGGAATTAAAGGCATGCACCACC.......................................................................... 11046_0_0_0_0_0_2 MATURE 2 28.57 0 0 2 28.57 25
.....................AGTGCTGGAATTAAAGGCATGCAC.............................................................................. 28180_0_0_0_0_0_2 MATURE 2 28.57 0 0 2 28.57 24
......................GTGCTGGAATTAAAGGCATGCAC.............................................................................. 26847_0_0_0_0_0_1 MATURE 1 14.29 0 0 1 14.29 23
........................GCTGGAATTAAAGGCATGCACC............................................................................. 26084_0_0_0_0_0_1 MATURE 1 14.29 0 0 1 14.29 22
...........................GGAATTAAAGGCATGCACCACC.......................................................................... 13608_0_0_0_0_0_1 MATURE 1 14.29 0 0 1 14.29 22
---------- ---------- ----------
7 0 7
(0.00) (100.00)
*** OTHER ***
__________________________________________________________________________________________________________________________
TCCACCTGTCTCTGCCTCCCGAGTGCTGGAATTAAAGGCATGCACCACCACTGCCCGGCAGGTTCTGTTATTTCTGAGTGTGAGAAATATATGGGGAAAAGTCTTCATGGTGAGTCCAAAGG REF 8 32213393 - 32213514
GAGTGCTGGAATTAAAGGCATG MATURE 8 32213414 - 32213556 mmu-miR-1186 -
__________________________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..............................ATTAAAGGCATGCACCACC.......................................................................... 29370_0_0_0_0_0_2 OTHER 2 40.00 0 0 2 40.00 19
................................TAAAGGCATGCACCACCACT....................................................................... 24658_0_0_0_0_0_1 OTHER 1 20.00 0 0 1 20.00 20
........TCTCTGCCTCCCGAGTGCTGGAAT........................................................................................... 36251_0_0_0_0_0_1 OTHER 1 20.00 0 0 1 20.00 24
..............................ATTAAAGGCATGCACCACCACT....................................................................... 36170_0_0_0_0_0_1 OTHER 1 20.00 0 0 1 20.00 22
---------- ---------- ----------
5 0 5
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 0 7 7 58.33%
OTHER 0 5 5 41.67%
---------- ---------- ----------
0 12 12
[END]