[BEGIN]
REFERENCE HAIRPIN
***********************************************************************************************************
ID : mmu-mir-103-1
DESCRIPTION : mmu-mir-103-1 MI0000587 Mus musculus miR-103-1 stem-loop
CHROMOSOME : 11
SPAN : 35595898 - 35595983
LENGTH : 86
SEQUENCE : TTCTTACTGCCCTCGGCTTCTTTACAGTGCTGCCTTGTTGCATATGGATCAAGCAGCATTGTACAGGGCTATGAAGGCATTGAGAC
OVERHANG THRESHOLD : 40%
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TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-103
ACCID : MI0000587
PARENT : mmu-mir-103-1
CHROMOSOME : 11
START : 35595898
STOP : 35595983
OFFSET : 52..74
SEQUENCE : AGCAGCATTGTACAGGGCTATGA
STRAND : +
******************************
*** MATURE ***
______________________________________________________________________________________
TTCTTACTGCCCTCGGCTTCTTTACAGTGCTGCCTTGTTGCATATGGATCAAGCAGCATTGTACAGGGCTATGAAGGCATTGAGAC REF 11 35595898 - 35595983
AGCAGCATTGTACAGGGCTATGA MATURE 11 35595950 - 35596057 mmu-miR-103 +
______________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...................................................AGCAGCATTGTACAGGGCTATGAAG........... 44119_0_0_0_0_0_1 MATURE 1 50.00 0 0 1 50.00 25
....................................................GCAGCATTGTACAGGGCTATGAAGt.......... 10673_0_0_0_0_0_1 MATURE 1 50.00 0 0 1 50.00 24
---------- ---------- ----------
2 0 2
(0.00) (100.00)
*** OTHER ***
______________________________________________________________________________________
TTCTTACTGCCCTCGGCTTCTTTACAGTGCTGCCTTGTTGCATATGGATCAAGCAGCATTGTACAGGGCTATGAAGGCATTGAGAC REF 11 35595898 - 35595983
AGCAGCATTGTACAGGGCTATGA MATURE 11 35595950 - 35596057 mmu-miR-103 +
______________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..............GGCTTCTTTACAGTGCcGCCT.................................................... 11950_0_0_0_0_0_1 OTHER 1 33.33 0 0.00 1 50.00 16C4
..............GGCTTCTTTACAGTGCTGaCTTGT................................................. 6037_0_0_0_0_0_1 OTHER 1 33.33 0 0.00 1 50.00 18A5
...............GCTTCTTTACAGTGCTGCgTTGTT................................................ 26399_1_0_0_0_0_0 OTHER 1 33.33 1 100.00 0 0.00 18G5
---------- ---------- ----------
3 1 2
(33.33) (66.67)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 0 2 2 40.00%
OTHER 1 2 3 60.00%
---------- ---------- ----------
1 4 5
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