[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-1-2-as
DESCRIPTION : mmu-mir-1-2-as MI0006283 Mus musculus miR-1-2-as stem-loop
CHROMOSOME : 18
SPAN : 10785444 - 10785565
LENGTH : 122
SEQUENCE : TTCCTTTAGCTTCTTCTTGGCGGACATTACCTACCCAAAATACATACTTCTTTACATTCCATAGCACTGAATGTTCATATGGGTACATAAAGAAGTATGTGCTCTGAGTAGGCACTCCTGCG
OVERHANG THRESHOLD : 40%
***********************************************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-1-2-as
ACCID : MI0006283
PARENT : mmu-mir-1-2-as
CHROMOSOME : 18
START : 10785444
STOP : 10785565
OFFSET : 41..61
SEQUENCE : TACATACTTCTTTACATTCCA
STRAND : +
******************************
*** MATURE ***
__________________________________________________________________________________________________________________________
TTCCTTTAGCTTCTTCTTGGCGGACATTACCTACCCAAAATACATACTTCTTTACATTCCATAGCACTGAATGTTCATATGGGTACATAAAGAAGTATGTGCTCTGAGTAGGCACTCCTGCG REF 18 10785444 - 10785565
TACATACTTCTTTACATTCCA MATURE 18 10785485 - 10785626 mmu-miR-1-2-as +
__________________________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......................................ATACATACTTCTTTACATTCCA.............................................................. 43697_7_0_0_0_0_119 MATURE 126 16.45 7 9.46 119 17.20 22
.........................................ACATACTTCTTTACATTCCA.............................................................. 42597_2_0_0_0_0_100 MATURE 102 13.32 2 2.70 100 14.45 20
........................................TACATACTTCTTTACATTCC............................................................... 40273_4_0_0_0_0_74 MATURE 78 10.18 4 5.41 74 10.69 20
.......................................ATACATACTTCTTTACAcTCCA.............................................................. 41338_4_0_0_0_0_40 MATURE 44 5.74 4 5.41 40 5.78 17C4
.........................................ACATACTTCTTTACATTCC............................................................... 43422_5_0_0_0_0_33 MATURE 38 4.96 5 6.76 33 4.77 19
......................................AATACATACTTCTTTACATTCCA.............................................................. 44277_1_0_0_0_0_37 MATURE 38 4.96 1 1.35 37 5.35 23
........................................TACATACTTCTTTACATTCa............................................................... 31778_5_0_0_0_0_29 MATURE 34 4.44 5 6.76 29 4.19 19
.......................................ATACATACTTCTTTACATTCC............................................................... 43344_9_0_0_0_0_23 MATURE 32 4.18 9 12.16 23 3.32 21
..........................................CATACTTCTTTACATTCCA.............................................................. 35049_2_0_0_0_0_18 MATURE 20 2.61 2 2.70 18 2.60 19
........................................TACATACTTCTTTACATTCCA.............................................................. 40121_0_0_0_0_0_15 MATURE 15 1.96 0 0.00 15 2.17 21
.......................................ATACATACTTCTTTACATTCa............................................................... 42373_5_0_0_0_0_9 MATURE 14 1.83 5 6.76 9 1.30 20
.......................................ATACATACTTCTTTACATTCCg.............................................................. 36855_5_0_0_0_0_9 MATURE 14 1.83 5 6.76 9 1.30 21
.......................................ATACATACTTCTTTACATaCCA.............................................................. 42323_0_0_0_0_0_13 MATURE 13 1.70 0 0.00 13 1.88 18A3
.......................................ATACATACTTCTTTACAaTCCA.............................................................. 40696_1_0_0_0_0_10 MATURE 11 1.44 1 1.35 10 1.45 17A4
.......................................ATACATACTTCTTTACATcCCA.............................................................. 29199_0_0_0_0_0_11 MATURE 11 1.44 0 0.00 11 1.59 18C3
.......................................ATACATACTTCTTTACATcCC............................................................... 36988_1_0_0_0_0_8 MATURE 9 1.17 1 1.35 8 1.16 18C2
......................................AATACATACTTCTTTACATcCCA.............................................................. 41373_0_0_0_0_0_7 MATURE 7 0.91 0 0.00 7 1.01 19C3
.......................................ATACATACTTCTTTACtTTCCA.............................................................. 37136_1_0_0_0_0_6 MATURE 7 0.91 1 1.35 6 0.87 16T5
.......................................ATACATACTTCTTTACAgTCCA.............................................................. 18538_2_0_0_0_0_4 MATURE 6 0.78 2 2.70 4 0.58 17G4
.......................................ATACATACTTCTTTACgTTCCA.............................................................. 23405_0_0_0_0_0_5 MATURE 5 0.65 0 0.00 5 0.72 16G5
......................................AATACATACTTCTTTACAaTCCA.............................................................. 30232_0_0_0_0_0_5 MATURE 5 0.65 0 0.00 5 0.72 18A4
......................................AATACATACTTCTTTACcTTCCA.............................................................. 24797_0_0_0_0_0_5 MATURE 5 0.65 0 0.00 5 0.72 17C5
........................................TACATACTTCTTTACAcTCCA.............................................................. 37212_0_0_0_0_0_5 MATURE 5 0.65 0 0.00 5 0.72 16C4
.......................................ATACATACTTCTTTACATTCCAT............................................................. 43500_2_0_0_0_0_2 MATURE 4 0.52 2 2.70 2 0.29 23
.......................................ATACATACTTCTTTACAaTCC............................................................... 28064_3_0_0_0_0_1 MATURE 4 0.52 3 4.05 1 0.14 17A3
......................................AATACATACTTCTTTACAcTCCA.............................................................. 33586_0_0_0_0_0_4 MATURE 4 0.52 0 0.00 4 0.58 18C4
.....................................AAATACATACTTCTTTACATTCCA.............................................................. 15214_1_0_0_0_0_3 MATURE 4 0.52 1 1.35 3 0.43 24
........................................TACcTACTTCTTTACATTCCA.............................................................. 43027_0_0_0_0_0_4 MATURE 4 0.52 0 0.00 4 0.58 3C17
........................................TACcTACTTCTTTACATTCCAc............................................................. 36565_1_0_0_0_0_2 MATURE 3 0.39 1 1.35 2 0.29 3C17
.......................................ATACATACTTCTTTACATaCC............................................................... 12522_2_0_0_0_0_1 MATURE 3 0.39 2 2.70 1 0.14 18A2
....................................AAAATACATACTTCTTTACATTCCA.............................................................. 40672_0_0_0_0_0_3 MATURE 3 0.39 0 0.00 3 0.43 25
.....................................AAAgACATACTTCTTTACATTCCA.............................................................. 5628_0_0_0_0_0_3 MATURE 3 0.39 0 0.00 3 0.43 3G20
.......................................ATACATACTTCTTTACATTC................................................................ 35378_0_0_0_0_0_2 MATURE 2 0.26 0 0.00 2 0.29 20
.........................................ACATACTTCTTTACATTCCg.............................................................. 23099_0_0_0_0_0_2 MATURE 2 0.26 0 0.00 2 0.29 19
.......................................ATACATACTTCTTTACATgCCA.............................................................. 43350_0_0_0_0_0_2 MATURE 2 0.26 0 0.00 2 0.29 18G3
........................................TACATACTTCTTTACATaCCA.............................................................. 43433_0_0_0_0_0_2 MATURE 2 0.26 0 0.00 2 0.29 17A3
.......................................ATACATACTTCTTTACATaCCAg............................................................. 31366_0_0_0_0_0_2 MATURE 2 0.26 0 0.00 2 0.29 18A3
......................................AATACATACTTCTTTACgTTCCA.............................................................. 30007_0_0_0_0_0_2 MATURE 2 0.26 0 0.00 2 0.29 17G5
......................................AATACATACTTCTTTACtTTCCA.............................................................. 25408_0_0_0_0_0_2 MATURE 2 0.26 0 0.00 2 0.29 17T5
........................................TACATACTTCTTTACATTaCA.............................................................. 16692_0_0_0_0_0_2 MATURE 2 0.26 0 0.00 2 0.29 18A2
.......................................ATACATACTTCTTTACATcCCg.............................................................. 35717_0_0_0_0_0_2 MATURE 2 0.26 0 0.00 2 0.29 18C2
........................................TAaATACTTCTTTACATTCCA.............................................................. 38675_0_0_0_0_0_2 MATURE 2 0.26 0 0.00 2 0.29 2A18
........................................TACATACTTCTTTACATTCCATAc........................................................... 33157_0_0_0_0_0_2 MATURE 2 0.26 0 0.00 2 0.29 23
.......................................ATACATACTTCTTTACATTaCA.............................................................. 5657_0_0_0_0_0_2 MATURE 2 0.26 0 0.00 2 0.29 19A2
....................................AAAATACATACTTCTTTACATcCCA.............................................................. 18487_1_0_0_0_0_1 MATURE 2 0.26 1 1.35 1 0.14 21C3
........................................TACATACTTCTTTACATTCCtTAc........................................................... 22266_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 20T2
........................................TAgATACTTCTTTACATTCCATA............................................................ 29169_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 2G20
....................................AAAATgCATACTTCTTTACATTCCA.............................................................. 24555_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 5G19
........................................TACcTACTTCTTTACATTCCAT............................................................. 31044_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 3C18
.........................................ACATACTTCTTTACATTCCATA............................................................ 3707_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 22
.......................................ATACATACTTCTTgACATTCCA.............................................................. 20384_1_0_0_0_0_0 MATURE 1 0.13 1 1.35 0 0.00 13G8
........................................TACATACTTCTTTACATTCt............................................................... 14445_1_0_0_0_0_0 MATURE 1 0.13 1 1.35 0 0.00 19
.........................................ACATACTTCTTTACAgTCCAT............................................................. 31726_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 15G5
.....................................AAtTACATACTTCTTTACATTCC............................................................... 5760_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 2T20
.........................................ACATACTTCTTTACATTCCAa............................................................. 10654_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 20
......................................AATACATACTTCTTTACATgCCA.............................................................. 21800_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 19G3
........................................TACATACTTCTTTACATTCCg.............................................................. 9746_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 20
.....................................AAATACATACTTCTTTACAaTCCA.............................................................. 38500_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 19A4
.......................................ATACATACTTCTTTACAcTCC............................................................... 24869_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 17C3
.......................................ATACATACTTCcTTACATTCC............................................................... 6141_1_0_0_0_0_0 MATURE 1 0.13 1 1.35 0 0.00 11C9
......................................AATACATACTTCTTTgCATTCCA.............................................................. 11118_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 15G7
....................................AAAgTACATACTTCTTTACATTCC............................................................... 2239_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 3G20
.......................................ATACATACTTCTTTACAgTCCg.............................................................. 9985_1_0_0_0_0_0 MATURE 1 0.13 1 1.35 0 0.00 17G3
....................................AAAgTACATACTTCTTTACATTCCA.............................................................. 27760_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 3G21
........................................TACATACTTCTTTACAaTCCA.............................................................. 32172_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 16A4
.......................................ATACATACTTCTTTACAaTCCg.............................................................. 25927_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 17A3
........................................TAaATACTTCTTTACATTCCAc............................................................. 36474_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 2A18
.......................................ATAtATACTTCTTTACATTCCA.............................................................. 8332_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 3T18
.....................................AAATACATACTTCTTTACATcCCA.............................................................. 31620_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 20C3
..........................................CATACTTCTTTACATTCCAa............................................................. 16417_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 19
........................................TAgATACTTCTTTACATTCCATAa........................................................... 15415_1_0_0_0_0_0 MATURE 1 0.13 1 1.35 0 0.00 2G20
.........................................ACATACTTCTTTACATTCtAT............................................................. 1890_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 18T2
...................................CAAAgTACATACTTCTTTACATTCC............................................................... 26421_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 4G20
.......................................ATACATACTTCTTTACATTCCt.............................................................. 35847_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 21
......................................AATtCATACTTCTTTACATTCCA.............................................................. 26224_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 3T19
.........................................ACATACTTCTTTACATcCCATA............................................................ 37535_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 16C5
.......................................ATACATACTTCTTTACATTCCATAt........................................................... 5068_1_0_0_0_0_0 MATURE 1 0.13 1 1.35 0 0.00 24
.......................................ATACATACTcCTTTACATTCC............................................................... 20447_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 9C11
.........................................ACATACTTCTTTACATTCCc.............................................................. 29592_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 19
............................................TACTTCTTTACATTCCATA............................................................ 29435_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 19
......................................AATACATACTTCTTTACATTCCAT............................................................. 30553_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 24
.......................................ATACATACTTCTTTACtTTCCg.............................................................. 26653_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 16T4
.....................................AAATACATACTTCTTTACcTTCCA.............................................................. 38066_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 18C5
.........................................ACATACTTCTTTACATTCCATAa........................................................... 3024_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 22
........................................TACgTACTTCTTTACATTCCA.............................................................. 8173_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 3G17
........................................TACATACTTCTTTACAcTCCAa............................................................. 25969_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 16C4
.....................................AAATACATACTTCTTTACATTCCt.............................................................. 30891_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 23
........................................TACATACTTCTTTACtTTCCA.............................................................. 40602_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 15T5
.......................................ATACgTACTTCTTTACATTCCA.............................................................. 3221_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 4G17
........................................TACtTACTTCTTTACATTCCATAa........................................................... 26534_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 3T19
........................................TACATACTTCTTTACATTCCATAa........................................................... 1948_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 23
........................................TACcTACTTCTTTACATTCCAg............................................................. 6462_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 3C17
.......................................ATACATACTTCTTTACtTTCC............................................................... 41430_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 16T4
....................................AAcATACATACTTCTTTACATTCCA.............................................................. 2050_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 2C22
.......................................ATACATACTTCTTTACATTCCAc............................................................. 8125_1_0_0_0_0_0 MATURE 1 0.13 1 1.35 0 0.00 22
........................................TACATACTTCTTTACgTTCCA.............................................................. 3186_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 15G5
.......................................ATcCATACTTCTTTACATTCCA.............................................................. 11077_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 2C19
........................................TACATACTTCTTTACATTCCAa............................................................. 41457_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 21
.....................................AAATACATACTTCTTTACATgCCAc............................................................. 29816_1_0_0_0_0_0 MATURE 1 0.13 1 1.35 0 0.00 20G3
.......................................ATACATACTTCTTTACATTtCAT............................................................. 23256_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 19T3
....................................AAAATACATACTTCTTTACAaTCCA.............................................................. 3973_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 20A4
........................................TACcTACTTCTTTACATTCCAa............................................................. 20686_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 3C17
.......................................ATACATACTTCTTTACATTt................................................................ 38549_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 19
.......................................ATACATACTTCTTTACATaCCg.............................................................. 34306_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 18A2
........................................TACATACTTCTTTACATcCCATA............................................................ 13990_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 17C5
.........................................ACATACTTCTTTACATTCCAc............................................................. 17348_1_0_0_0_0_0 MATURE 1 0.13 1 1.35 0 0.00 20
.........................................ACATACTTCTTTACATTCCATc............................................................ 14959_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 21
.......................................ATACATACTTCTTTACAcTCCAc............................................................. 38823_1_0_0_0_0_0 MATURE 1 0.13 1 1.35 0 0.00 17C4
........................................TACATACTTCTTTACATTaCAc............................................................. 7040_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 18A2
..........................................CATACTTCTTTACATTCCAg............................................................. 24159_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 19
.......................................ATACATACTTCTcTACATTCCA.............................................................. 2410_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 12C9
.......................................ATACATACTTCTTTACATTCCAaAG........................................................... 41431_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 22A2
.......................................ATACATACTTCTTTACATaCCAT............................................................. 14198_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 18A4
............................................TACTTCTTTACATTCCATAt........................................................... 30908_0_0_0_0_0_1 MATURE 1 0.13 0 0.00 1 0.14 19
---------- ---------- ----------
766 74 692
(9.66) (90.34)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
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MATURE 74 692 766 100.00%
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74 692 766
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