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REFERENCE HAIRPIN
**************************************************************************************************
ID                 : mmu-mir-1-1
DESCRIPTION        : mmu-mir-1-1 MI0000139 Mus musculus miR-1-1 stem-loop
CHROMOSOME         : 2
SPAN               : 180123753 - 180123829
LENGTH             : 77
SEQUENCE           : GCTTGGGACACATACTTCTTTATATGCCCATATGAACCTGCTAAGCTATGGAATGTAAAGAAGTATGTATTTCAGGC
OVERHANG THRESHOLD : 40%
**************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-1
ACCID      : MI0000139
PARENT     : mmu-mir-1-1
CHROMOSOME : 2
START      : 180123753
STOP       : 180123829
OFFSET     : 49..70
SEQUENCE   : TGGAATGTAAAGAAGTATGTAT
STRAND     : +
******************************



*** OTHER ***
_____________________________________________________________________________
GCTTGGGACACATACTTCTTTATATGCCCATATGAACCTGCTAAGCTATGGAATGTAAAGAAGTATGTATTTCAGGC REF                  2                    180123753 - 180123829 
                                                TGGAATGTAAAGAAGTATGTAT        MATURE               2                    180123802 - 180123899 mmu-miR-1            +                    
_____________________________________________________________________________

                                                                         -SEQ-              -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.........ACATACTTCTTTAcATGCCCA................................................   36434_0_0_0_0_0_2        OTHER            2       100.00            0            0            2       100.00                      13C7   
                                                                                                                  ----------                ----------                ----------   
                                                                                                                           2                         0                         2                                          
                                                                                                                                                (0.00)                  (100.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
          OTHER               0               2               2         100.00%
                     ----------      ----------      ----------                
                              0               2               2                



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