[BEGIN]

REFERENCE HAIRPIN
********************************************************************************************************
ID                 : mmu-let-7f-2
DESCRIPTION        : mmu-let-7f-2 MI0000563 Mus musculus let-7f-2 stem-loop
CHROMOSOME         : X
SPAN               : 148346889 - 148346971
LENGTH             : 83
SEQUENCE           : TGTGGGATGAGGTAGTAGATTGTATAGTTTTAGGGTCATACCCCATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG
OVERHANG THRESHOLD : 40%
********************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-let-7f
ACCID      : MI0000563
PARENT     : mmu-let-7f-2
CHROMOSOME : X
START      : 148346889
STOP       : 148346971
OFFSET     : 8..29
SEQUENCE   : TGAGGTAGTAGATTGTATAGTT
STRAND     : +
******************************



*** MATURE ***
___________________________________________________________________________________
TGTGGGATGAGGTAGTAGATTGTATAGTTTTAGGGTCATACCCCATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG REF                  X                    148346889 - 148346971 
       TGAGGTAGTAGATTGTATAGTT                                                       MATURE               X                    148346897 - 148347000 mmu-let-7f           +                    
___________________________________________________________________________________

                                                                               -SEQ-                  -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.......TGgGGTAGTAGATTGTATAGTT.......................................................   40291_206_0_0_0_0_441       MATURE          647        17.78          206        14.86          441        19.58                      2G19   
.......TGAGGTAGTAGATTGTATAGTTT......................................................   42189_160_0_0_0_0_279       MATURE          439        12.07          160        11.54          279        12.39                        23   
.......TGAGGTAGTAGATTGTAgAGTTT......................................................   34947_103_0_0_0_0_216       MATURE          319         8.77          103         7.43          216         9.59                      17G5   
.......TGAGGTAGTAGATTGTAaAGTTT......................................................   35347_108_0_0_0_0_161       MATURE          269         7.39          108         7.79          161         7.15                      17A5   
.......TGAGGTAGTAGATTGTATAGTTTa.....................................................     18563_87_0_0_0_0_60       MATURE          147         4.04           87         6.28           60         2.66                        23   
.......TGAGGTAGTAGATTGTAcAGTTT......................................................     38819_60_0_0_0_0_85       MATURE          145         3.99           60         4.33           85         3.77                      17C5   
........GAGGTAGTAGATTGTATAGTT.......................................................     41737_38_0_0_0_0_92       MATURE          130         3.57           38         2.74           92         4.09                        21   
........GAGGTAGTAGATTGTATAGT........................................................     40634_23_0_0_0_0_96       MATURE          119         3.27           23         1.66           96         4.26                        20   
.........AGGTAGTAGATTGTATAGT........................................................     43854_37_0_0_0_0_75       MATURE          112         3.08           37         2.67           75         3.33                        19   
.......TGAGGTAGTAGtTTGTATAGTTT......................................................     41015_49_0_0_0_0_53       MATURE          102         2.80           49         3.54           53         2.35                     11T11   
........GAGGTAGTAGATTGTATAaTT.......................................................     39892_37_0_0_0_0_44       MATURE           81         2.23           37         2.67           44         1.95                      18A2   
.......TGAaGTAGTAGATTGTATAGTT.......................................................     41266_13_0_0_0_0_56       MATURE           69         1.90           13         0.94           56         2.49                      3A18   
.........AGGTAGTAGATTGTATAGTT.......................................................     44060_28_0_0_0_0_38       MATURE           66         1.81           28         2.02           38         1.69                        20   
........GAGGTAGTAGATTGTAaAGTT.......................................................     34914_28_0_0_0_0_34       MATURE           62         1.70           28         2.02           34         1.51                      16A4   
.......TGgGGTAGTAGATTGTATAGTa.......................................................     38177_17_0_0_0_0_40       MATURE           57         1.57           17         1.23           40         1.78                      2G18   
..........GGTAGTAGATTGTATAGTT.......................................................     44108_23_0_0_0_0_33       MATURE           56         1.54           23         1.66           33         1.47                        19   
........GAGGTAGTAGATTGTcTAGTT.......................................................     44089_15_0_0_0_0_34       MATURE           49         1.35           15         1.08           34         1.51                      15C5   
........GAGGTAGTAGATTGTAgAGTT.......................................................     43099_13_0_0_0_0_32       MATURE           45         1.24           13         0.94           32         1.42                      16G4   
.......TGAGGTAGTAGATTGTATAGTTTT.....................................................     32668_17_0_0_0_0_20       MATURE           37         1.02           17         1.23           20         0.89                        24   
........GAGGTAGTAGATTGTATAaTTa......................................................      40012_19_0_0_0_0_6       MATURE           25         0.69           19         1.37            6         0.27                      18A2   
........GAGGTAGTAGATTGTATAG.........................................................      37665_4_0_0_0_0_21       MATURE           25         0.69            4         0.29           21         0.93                        19   
........GAGGTAGTAGATTGTAcAGTT.......................................................      38895_6_0_0_0_0_15       MATURE           21         0.58            6         0.43           15         0.67                      16C4   
.......TGtGGTAGTAGATTGTATAGTTTa.....................................................       1426_4_0_0_0_0_16       MATURE           20         0.55            4         0.29           16         0.71                      2T20   
.........AGGTAGTAGATTGTATAaTTT......................................................      38230_17_0_0_0_0_2       MATURE           19         0.52           17         1.23            2         0.09                      17A3   
.......TGAGGTAGTAGATTGTATcGTTT......................................................      38439_5_0_0_0_0_14       MATURE           19         0.52            5         0.36           14         0.62                      18C4   
.......TGAGGTAGTAGATTGTATAGTTTc.....................................................       26966_9_0_0_0_0_7       MATURE           16         0.44            9         0.65            7         0.31                        23   
.......TGAGGTAGTAGATTGTATAGTTTg.....................................................      16878_12_0_0_0_0_3       MATURE           15         0.41           12         0.87            3         0.13                        23   
.......TGgGGTAGTAGATTGTATAGTc.......................................................      37771_4_0_0_0_0_11       MATURE           15         0.41            4         0.29           11         0.49                      2G18   
.......TGAGGTAGTAGATTGTATAGaTT......................................................       27241_6_0_0_0_0_8       MATURE           14         0.38            6         0.43            8         0.36                      20A2   
.......TGcGGTAGTAGATTGTATAGTT.......................................................      26097_1_0_0_0_0_13       MATURE           14         0.38            1         0.07           13         0.58                      2C19   
........GAGGTAGTAGATTGTATAaTTg......................................................       34373_8_0_0_0_0_5       MATURE           13         0.36            8         0.58            5         0.22                      18A2   
.........AGGTAGTAGATTGTATAGTTT......................................................       42382_9_0_0_0_0_3       MATURE           12         0.33            9         0.65            3         0.13                        21   
........GAGGTAGTAGATTGTATAGcTTa.....................................................      22730_10_0_0_0_0_1       MATURE           11         0.30           10         0.72            1         0.04                      19C2   
.......TGtGGTAGTAGATTGTATAGTT.......................................................       42412_5_0_0_0_0_5       MATURE           10         0.27            5         0.36            5         0.22                      2T19   
.......TGgGGTAGTAGATTGTATAGTTT......................................................       42422_2_0_0_0_0_8       MATURE           10         0.27            2         0.14            8         0.36                      2G20   
.......TGAGGTAGTAGATTGTATAaTT.......................................................       40403_9_0_0_0_0_1       MATURE           10         0.27            9         0.65            1         0.04                      19A2   
.......TGAGGTAGTAGATTGTATAGTT.......................................................       43112_5_0_0_0_0_4       MATURE            9         0.25            5         0.36            4         0.18                        22   
........GAGGTAGTAGATTGTgTAGTT.......................................................       29675_4_0_0_0_0_5       MATURE            9         0.25            4         0.29            5         0.22                      15G5   
.......TGAGGTAGTAGATTGTATAGTTaTA....................................................       43883_3_0_0_0_0_5       MATURE            8         0.22            3         0.22            5         0.22                      22A2   
........GAGGTAGTAGATTGTATAGa........................................................       37069_3_0_0_0_0_5       MATURE            8         0.22            3         0.22            5         0.22                        19   
........GAGGTAGTAGATTGTATAGTTa......................................................       36783_2_0_0_0_0_6       MATURE            8         0.22            2         0.14            6         0.27                        21   
........GAGGTAGTAGATTGTAaAGTTa......................................................       37774_4_0_0_0_0_4       MATURE            8         0.22            4         0.29            4         0.18                      16A4   
.......TGAGGTAGTAGATTGTATAGT........................................................       39899_3_0_0_0_0_5       MATURE            8         0.22            3         0.22            5         0.22                        21   
........GAGGTAGTAGATTGTATAGTTT......................................................       41383_5_0_0_0_0_3       MATURE            8         0.22            5         0.36            3         0.13                        22   
.......TGgGGTAGTAGATTGTATAGTTa......................................................       35306_0_0_0_0_0_7       MATURE            7         0.19            0         0.00            7         0.31                      2G19   
........GAGGTAGTAGATTGTATAGTTTa.....................................................       42141_5_0_0_0_0_2       MATURE            7         0.19            5         0.36            2         0.09                        22   
........GAGGTAGTAGtTTGTATAGTT.......................................................       38297_4_0_0_0_0_3       MATURE            7         0.19            4         0.29            3         0.13                     10T10   
.........AGGTAGTAGATTGTAgAGTTT......................................................       42028_3_0_0_0_0_3       MATURE            6         0.16            3         0.22            3         0.13                      15G5   
.........AGGTAGTAGATTGTATAGTaTT.....................................................       37447_4_0_0_0_0_2       MATURE            6         0.16            4         0.29            2         0.09                      19A2   
.........AGGTAGTAGATTGTAcAGTTT......................................................       43029_3_0_0_0_0_3       MATURE            6         0.16            3         0.22            3         0.13                      15C5   
.........AGGTAGTAGATTGTATAGTTa......................................................       36108_5_0_0_0_0_1       MATURE            6         0.16            5         0.36            1         0.04                        20   
........GAGGTAGTAGATTGTATAGgTTa.....................................................       34857_3_0_0_0_0_3       MATURE            6         0.16            3         0.22            3         0.13                      19G2   
.......TGAGGTAGTAGATTGTATAGTTa......................................................       30568_4_0_0_0_0_2       MATURE            6         0.16            4         0.29            2         0.09                        22   
........GAGGTAGTAGATTGTATAGaTT......................................................       44080_4_0_0_0_0_2       MATURE            6         0.16            4         0.29            2         0.09                      19A2   
........GAGGTAGTAGATTGTATAGTa.......................................................       41079_2_0_0_0_0_4       MATURE            6         0.16            2         0.14            4         0.18                        20   
.........AGGTAGTAGATTGTATAGTTTa.....................................................       19525_4_0_0_0_0_2       MATURE            6         0.16            4         0.29            2         0.09                        21   
..........GGTAGTAGATTGTATAGTTa......................................................       29862_1_0_0_0_0_4       MATURE            5         0.14            1         0.07            4         0.18                        19   
........GAGGTAGTAGATTGTATAGTTTT.....................................................       38685_2_0_0_0_0_3       MATURE            5         0.14            2         0.14            3         0.13                        23   
......ATGAGGTAGTAGATTGTATAaTT.......................................................       27054_2_0_0_0_0_3       MATURE            5         0.14            2         0.14            3         0.13                      20A2   
......ATGAGGTAGTAGATTGTATAGTT.......................................................       39539_3_0_0_0_0_2       MATURE            5         0.14            3         0.22            2         0.09                        23   
........GAGGTAGTAGATTGTATAGaTTa.....................................................       32270_3_0_0_0_0_2       MATURE            5         0.14            3         0.22            2         0.09                      19A2   
..........GGTAGTAGATTGTATAGTTT......................................................       41799_4_0_0_0_0_1       MATURE            5         0.14            4         0.29            1         0.04                        20   
.......TGAGGTAGTAGATTGTAaAGTTa......................................................       32945_1_0_0_0_0_3       MATURE            4         0.11            1         0.07            3         0.13                      17A4   
.......TGAGGTAGTAGATTGTATtGTTT......................................................       43661_1_0_0_0_0_3       MATURE            4         0.11            1         0.07            3         0.13                      18T4   
.......TGtGGTAGTAGATTGTATAGTTT......................................................       22736_2_0_0_0_0_2       MATURE            4         0.11            2         0.14            2         0.09                      2T20   
........GAGGTAGTAGATTGTtTAGTT.......................................................       27088_0_0_0_0_0_4       MATURE            4         0.11            0         0.00            4         0.18                      15T5   
.......TGtGGTAGTAGATTGTATAGTTTT.....................................................       28061_1_0_0_0_0_3       MATURE            4         0.11            1         0.07            3         0.13                      2T21   
........GAGGTAGTAGATTGTAgAGTTa......................................................       41765_2_0_0_0_0_2       MATURE            4         0.11            2         0.14            2         0.09                      16G4   
.........AGGTAGTAGATTGTATAGcTT......................................................       43049_2_0_0_0_0_2       MATURE            4         0.11            2         0.14            2         0.09                      18C2   
......ATGAGGTAGTAGATTGTAaAGTT.......................................................       43007_2_0_0_0_0_2       MATURE            4         0.11            2         0.14            2         0.09                      18A4   
.......TGAGGTAGTAGATTGcATAGT........................................................       33000_2_0_0_0_0_2       MATURE            4         0.11            2         0.14            2         0.09                      15C5   
.......TGAtGTAGTAGATTGTATAGTT.......................................................       21130_1_0_0_0_0_3       MATURE            4         0.11            1         0.07            3         0.13                      3T18   
.......TGAaGTAGTAGATTGTATAGTTT......................................................       35544_2_0_0_0_0_2       MATURE            4         0.11            2         0.14            2         0.09                      3A19   
.....GATGAGGTAGTAGATTGTATAGTT.......................................................       36597_1_0_0_0_0_3       MATURE            4         0.11            1         0.07            3         0.13                        24   
.......TGAaGTAGTAGATTGTATAGTc.......................................................       39934_0_0_0_0_0_4       MATURE            4         0.11            0         0.00            4         0.18                      3A17   
........GAGGTAGTAGATTGTATAGcTT......................................................       43520_4_0_0_0_0_0       MATURE            4         0.11            4         0.29            0         0.00                      19C2   
.........AGGTAGTAGATTGTATAGaTTa.....................................................       39485_1_0_0_0_0_2       MATURE            3         0.08            1         0.07            2         0.09                      18A2   
.......TGAcGTAGTAGATTGTATAGTT.......................................................       44285_1_0_0_0_0_2       MATURE            3         0.08            1         0.07            2         0.09                      3C18   
.......TGAGGTAGTAGATTGTATAGTTTTg....................................................       14428_2_0_0_0_0_1       MATURE            3         0.08            2         0.14            1         0.04                        24   
.....GAaGAGGTAGTAGATTGTATAGTT.......................................................        6410_0_0_0_0_0_3       MATURE            3         0.08            0         0.00            3         0.13                      2A21   
.......TGAGGTAGTAGATTGTAgAGTTa......................................................       34798_3_0_0_0_0_0       MATURE            3         0.08            3         0.22            0         0.00                      17G4   
........GAGGTAGTAGATTGTATAaTTT......................................................       41668_3_0_0_0_0_0       MATURE            3         0.08            3         0.22            0         0.00                      18A3   
.........AGGTAGTAGATTGTAaAGTTT......................................................       28121_1_0_0_0_0_2       MATURE            3         0.08            1         0.07            2         0.09                      15A5   
........GAGGTAGTAGATTGTATAtTT.......................................................       33063_2_0_0_0_0_1       MATURE            3         0.08            2         0.14            1         0.04                      18T2   
.......TGAGGTAGTAGATTGTgTAGTTT......................................................       36031_1_0_0_0_0_2       MATURE            3         0.08            1         0.07            2         0.09                      16G6   
........GAGGTAGTAGATTGTAgAGTTT......................................................       40863_0_0_0_0_0_3       MATURE            3         0.08            0         0.00            3         0.13                      16G5   
........GAGGTAGTAGATTGTATcGTT.......................................................       22850_0_0_0_0_0_3       MATURE            3         0.08            0         0.00            3         0.13                      17C3   
.......TGAaGTAGTAGATTGTATAGTg.......................................................       41372_1_0_0_0_0_2       MATURE            3         0.08            1         0.07            2         0.09                      3A17   
........GAGGTAGTAGATTGTATAGcTTT.....................................................       35665_3_0_0_0_0_0       MATURE            3         0.08            3         0.22            0         0.00                      19C3   
........GAGGTAGTAGATTGTAaAGTTT......................................................       33154_2_0_0_0_0_1       MATURE            3         0.08            2         0.14            1         0.04                      16A5   
.......TGgGGTAGTAGATTGTATAGTg.......................................................       29963_0_0_0_0_0_3       MATURE            3         0.08            0         0.00            3         0.13                      2G18   
.......TGAGGTAGTAGATTGTATAG.........................................................       21592_1_0_0_0_0_2       MATURE            3         0.08            1         0.07            2         0.09                        20   
........GAGGTAGTAGATTGTATAGc........................................................       44321_0_0_0_0_0_3       MATURE            3         0.08            0         0.00            3         0.13                        19   
...........GTAGTAGATTGTATAGTTTa.....................................................       41250_1_0_0_0_0_1       MATURE            2         0.05            1         0.07            1         0.04                        19   
.......TGAaGTAGTAGATTGTATAGTa.......................................................       31437_0_0_0_0_0_2       MATURE            2         0.05            0         0.00            2         0.09                      3A17   
.........AGGTAGTAGATTGTATAaTTTa.....................................................       21211_0_0_0_0_0_2       MATURE            2         0.05            0         0.00            2         0.09                      17A3   
.......TGtGGTAGTAGATTGTATAGTTTg.....................................................       20845_0_0_0_0_0_2       MATURE            2         0.05            0         0.00            2         0.09                      2T20   
.......TGAaGTAGTAGATTGTATAGTTTT.....................................................       41660_1_0_0_0_0_1       MATURE            2         0.05            1         0.07            1         0.04                      3A20   
........GAGGTAGTAGATTGTATAGgTT......................................................        8205_1_0_0_0_0_1       MATURE            2         0.05            1         0.07            1         0.04                      19G2   
.....GATGAGGTAGTAGATTGTAcAGTT.......................................................       40270_2_0_0_0_0_0       MATURE            2         0.05            2         0.14            0         0.00                      19C4   
.....GATGAGGTAGTAGATTGTATAaTT.......................................................       42570_0_0_0_0_0_2       MATURE            2         0.05            0         0.00            2         0.09                      21A2   
........GAGGTAGTAGATTGTATAGaTTT.....................................................       23186_1_0_0_0_0_1       MATURE            2         0.05            1         0.07            1         0.04                      19A3   
...........GTAGTAGATTGTATAGTTT......................................................        5301_2_0_0_0_0_0       MATURE            2         0.05            2         0.14            0         0.00                        19   
.......TGAGGTAGTAGATTGTATAGgTT......................................................       21405_0_0_0_0_0_2       MATURE            2         0.05            0         0.00            2         0.09                      20G2   
.....GATGAGGTAGTAGATTGTATAGTTT......................................................       16671_1_0_0_0_0_1       MATURE            2         0.05            1         0.07            1         0.04                        25   
.........AGGTAGTAGATTGTATAGTc.......................................................       24767_0_0_0_0_0_2       MATURE            2         0.05            0         0.00            2         0.09                        19   
...........GTAGTAGATTGTATAGTTTT.....................................................       38466_1_0_0_0_0_1       MATURE            2         0.05            1         0.07            1         0.04                        20   
........GAaGTAGTAGATTGTATAGTT.......................................................       29515_1_0_0_0_0_1       MATURE            2         0.05            1         0.07            1         0.04                      2A18   
.......TGAGGTAGTAGATTGaATAGT........................................................       32645_1_0_0_0_0_1       MATURE            2         0.05            1         0.07            1         0.04                      15A5   
.......TGAcGTAGTAGATTGTATAGTTa......................................................       43276_2_0_0_0_0_0       MATURE            2         0.05            2         0.14            0         0.00                      3C18   
.......TGAcGTAGTAGATTGTATAGTTTT.....................................................       36160_1_0_0_0_0_1       MATURE            2         0.05            1         0.07            1         0.04                      3C20   
..........GGTAGTAGATTGTATAGgTTT.....................................................       19166_0_0_0_0_0_2       MATURE            2         0.05            0         0.00            2         0.09                      17G3   
.......TGAGGTAGTAGATTGTAgAGTT.......................................................       25081_1_0_0_0_0_1       MATURE            2         0.05            1         0.07            1         0.04                      17G4   
.....GATGAGGTAGTAGATTGTATAGT........................................................       33174_1_0_0_0_0_1       MATURE            2         0.05            1         0.07            1         0.04                        23   
........GAGGTAGTAGATTGTAcAGTTa......................................................       39966_2_0_0_0_0_0       MATURE            2         0.05            2         0.14            0         0.00                      16C4   
.......TGcGGTAGTAGATTGTATAGTa.......................................................       11613_1_0_0_0_0_1       MATURE            2         0.05            1         0.07            1         0.04                      2C18   
.........AGGTAGTAGATTGTATAGTTTT.....................................................       31459_2_0_0_0_0_0       MATURE            2         0.05            2         0.14            0         0.00                        22   
........GAGGTAGTAGATTGTATAGg........................................................        3730_0_0_0_0_0_2       MATURE            2         0.05            0         0.00            2         0.09                        19   
.......TGcGGTAGTAGATTGTATAGTTTT.....................................................       34349_1_0_0_0_0_1       MATURE            2         0.05            1         0.07            1         0.04                      2C21   
.......TGAGGTAGTAGATTGTATAcTTa......................................................       35826_1_0_0_0_0_1       MATURE            2         0.05            1         0.07            1         0.04                      19C2   
.........AGGTAGTAGATTGTATAGaTT......................................................       40621_2_0_0_0_0_0       MATURE            2         0.05            2         0.14            0         0.00                      18A2   
.........AGGTAGTAGATTGTATAGTa.......................................................       34562_1_0_0_0_0_1       MATURE            2         0.05            1         0.07            1         0.04                        19   
.......TGAGGTAGTAGATTGTATAGc........................................................        4465_1_0_0_0_0_1       MATURE            2         0.05            1         0.07            1         0.04                        20   
......ATGAGGTAGTAGATTGTAgAGTTa......................................................       21360_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      18G4   
.......TGAaGTAGTAGATTGTATAGT........................................................       29118_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      3A17   
........GAGGTAGTAGATTGTATAGTTaTAa...................................................       34224_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      21A2   
.......TGAGGTAGTAGATTGTATAa.........................................................       22911_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                        19   
........GAtGTAGTAGATTGTATAGTTa......................................................        7151_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      2T18   
.........AGGTAGTAGATTGTATAGcTTa.....................................................       15287_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      18C2   
........GAGGTAGTAGATTGTATAGTTTaAG...................................................       33407_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      22A2   
......ATGAGGTAGTAGATTGTgTAGTT.......................................................       19624_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      17G5   
.......TGAGGTAGTAGATTGTATAGaTTa.....................................................         469_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      20A2   
..........GGTAGTAGATTGTATAGaTTT.....................................................        7482_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      17A3   
...GGcATGAGGTAGTAGATTGTATAGT........................................................       37935_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      2C22   
..........GGTAGTAGATTGTATAGTTaTAa...................................................       18505_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      19A2   
......ATGAGGTAGTAGATTGTAaAGTTT......................................................       38746_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      18A5   
......ATGAGGTAGTAGATTGTATAGTTa......................................................        8561_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                        23   
.....GATGAGGTAGTAGATTGTAaAGT........................................................        2381_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      19A3   
.......TGgGGTAGTAGATTGTATAGT........................................................       14560_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      2G18   
.......TGAGGTAGTAGATTGTATcGT........................................................       20789_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      18C2   
.....GATGAGGTAGTAGATTGTATAtTT.......................................................        7319_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      21T2   
......ATGAGGTAGTAGATTGTcTAGTT.......................................................        5554_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      17C5   
........GAGGTAGTAGATTGTATAtTTa......................................................       34976_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      18T2   
.......TGcGGTAGTAGATTGTATAGTTT......................................................       44287_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      2C20   
.......TGAGGTAGTAGATTGTATA..........................................................        3633_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                        19   
.........AGGTAGTAGATTGTATAGgTTT.....................................................       15061_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      18G3   
.......TGcGGTAGTAGATTGTATAGT........................................................       39129_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      2C18   
........GAGGTAGTAGATTGTATAcTTT......................................................        3331_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      18C3   
.....GATGAGGTAGTAGATTGTATAGTTg......................................................       35597_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                        24   
.......TGAGGTAGTAGATTGTATAGgTTT.....................................................       30246_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      20G3   
..........GGTAGTAGATTGTATAGTTTa.....................................................        8755_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                        20   
.......TGAGGTAGTAGATTGTAaAGT........................................................       29693_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      17A3   
.....GATGAGGTAGTAGATTGTAaAGTTT......................................................        2265_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      19A5   
.......TGAGGTAGTAGATTGTATAGTa.......................................................       14437_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                        21   
.....GATGAGGTAGTAGATTGTgTAGT........................................................       18838_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      18G4   
.........AGGTAGTAGtTTGTATAGTTT......................................................       25489_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      9T11   
..........GGTAGTAGATTGTATAGTTgTAGGG.................................................       40166_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      19G5   
.......TGAGGTAGTAGATTGTATAGaTTT.....................................................       20803_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      20A3   
........GAtGTAGTAGATTGTATAGTT.......................................................       28813_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      2T18   
......ATGAGGTAGTAGATTGTATAGTc.......................................................       12345_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                        22   
......ATGAGGTAGTAGATTGTAcAGTT.......................................................       16103_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      18C4   
.....GATGAGGTAGTAGATTGcATAGT........................................................       12061_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      17C5   
.......TGAcGTAGTAGATTGTATAGT........................................................       10943_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      3C17   
.........AGGTAGTAGATTGTATAGTTTg.....................................................       35814_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                        21   
.......TGAcGTAGTAGATTGTATAGTTT......................................................       28063_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      3C19   
.....GATGAGGTAGTAGATTGTAgAGTT.......................................................       28370_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      19G4   
......ATGAGGTAGTAGATTGTATAGaTT......................................................       21011_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      21A2   
.........AGGTAGTAGATTGTATAGgTTa.....................................................        7176_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      18G2   
.......TGAGGTAGTAGATTGTtTAGTT.......................................................        8539_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      16T5   
..........GGTAGTAGATTGTATAGTTTg.....................................................       10369_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                        20   
........GAGGTAGTAGATTGTATAcTTa......................................................       10522_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      18C2   
........GAaGTAGTAGATTGTATAGTTT......................................................       23267_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      2A19   
......ATGAGGTAGTAGATTGTATAcTTa......................................................       40317_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      20C2   
.....GATGAGGTAGTAGATTGTATcGTT.......................................................        9388_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      20C3   
.......TGAGGTAGTAGATTGTATAGTgTTA....................................................       27602_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      21G3   
........GAGGTAGTAGATTGTAcAGTTT......................................................       19536_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      16C5   
......ATGAaGTAGTAGATTGTATAGTTT......................................................       28774_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      4A19   
........GAGGTAGTAGATTGTATtGTTa......................................................       34730_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      17T3   
.......TGAGGTAGTAGATTGTATAaTTa......................................................       21185_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      19A2   
........GAGGTAGTAGATTGTATAGTcTT.....................................................       12918_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      20C2   
.......TGAGGTAGTAGATTGTATAGTaTTt....................................................       22171_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      21A2   
........GAGGTAGTAGATTGTATAGTgTT.....................................................       40264_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      20G2   
......ATGAGGTAGTAGATTGTATAGgTTa.....................................................       33545_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      21G2   
........GAGGTAGTAGATTGTATtGTTTT.....................................................        6019_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      17T5   
.......TGAGGTAGTAGATTGTATtGTTa......................................................       36828_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      18T3   
.........AGGTAGTAGATTGTATAGcTTT.....................................................        1782_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      18C3   
.......TGAGGTAGTAGATTGTAaAGTT.......................................................       14557_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      17A4   
.......TGAGGTAGTAGATTGTATAGTTcTA....................................................        3943_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      22C2   
......ATGAGGTAGTAGATTGTAcAGTTa......................................................        9130_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      18C4   
........GAGGTgGTAGATTGTATAGTT.......................................................       14313_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      5G15   
.........AGGTAGTAGATTGTATAGaTTT.....................................................       11474_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      18A3   
.......TGAGGTAGTAGtTTGTATAGTTTT.....................................................       31124_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                     11T12   
.........AGGTAGTAGATTGTATAGTgTT.....................................................       16536_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      19G2   
........GAGGTAGTAGATTGTATAGTTTTAt...................................................       13460_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                        24   
.....GATGAGGTAGTAGATTGTtTAGTTa......................................................        9522_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      18T5   
........GAGGTAGTAGATTGTATAGTaTT.....................................................       24211_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      20A2   
......ATGAGGTAGTAGATTGTAgAGTTT......................................................       44205_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      18G5   
........GAGGTAGTAGATTGTATtGTTT......................................................       18841_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      17T4   
..........GGTAGTAGATTGTATAGTTTT.....................................................       43079_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                        21   
........GAGGTAGTAGATTGTATAcTT.......................................................        9885_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      18C2   
......ATGAGGTAGTAGATTGTATAGgTTT.....................................................       26425_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      21G3   
.......TGAGGTAGTAGATTGTAgAGT........................................................       36796_0_0_0_0_0_1       MATURE            1         0.03            0         0.00            1         0.04                      17G3   
.....GAaGAGGTAGTAGATTGTATAGTa.......................................................       23254_1_0_0_0_0_0       MATURE            1         0.03            1         0.07            0         0.00                      2A20   
                                                                                                                            ----------                ----------                ----------   
                                                                                                                                  3638                      1386                      2252                                          
                                                                                                                                                         (38.10)                   (61.90)                                       




*** OTHER ***
___________________________________________________________________________________
TGTGGGATGAGGTAGTAGATTGTATAGTTTTAGGGTCATACCCCATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG REF                  X                    148346889 - 148346971 
       TGAGGTAGTAGATTGTATAGTT                                                       MATURE               X                    148346897 - 148347000 mmu-let-7f           +                    
___________________________________________________________________________________

                                                                               -SEQ-                -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
......................................................TAtCTATACAGTCTACTGTCTTTCt.....   17571_42_0_0_0_0_20        OTHER           62        80.52           42        91.30           20        64.52                      2T21   
......................................................TAACTATACAGTCTACTGTCTTTCt.....     23848_1_0_0_0_0_4        OTHER            5         6.49            1         2.17            4        12.90                        24   
......................................................TAACTATACAGTCTACTGTCTTTCa.....     27190_0_0_0_0_0_2        OTHER            2         2.60            0         0.00            2         6.45                        24   
......................................................TAgCTATACAGTCTACTGTCTTTC......     28516_1_0_0_0_0_1        OTHER            2         2.60            1         2.17            1         3.23                      2G21   
......................................................TAtCTATACAGTCTACTGTCTTTCC.....     34060_0_0_0_0_0_1        OTHER            1         1.30            0         0.00            1         3.23                      2T22   
......................................................TAtCTATACAGTCTACTGTCTTTCa.....      3187_1_0_0_0_0_0        OTHER            1         1.30            1         2.17            0         0.00                      2T21   
......................................................TAcCTATACAGTCTACTGTCTTTCa.....      3557_0_0_0_0_0_1        OTHER            1         1.30            0         0.00            1         3.23                      2C21   
......................................................TAtCTATACAGTCTACTGTCTTTCg.....     39720_0_0_0_0_0_1        OTHER            1         1.30            0         0.00            1         3.23                      2T21   
.........................................................CTATACAGTCTACTGTCTTaCCt....     33458_1_0_0_0_0_0        OTHER            1         1.30            1         2.17            0         0.00                      19A2   
......................................................TAACTATACAGTCTACTGTCTTTCC.....     34974_0_0_0_0_0_1        OTHER            1         1.30            0         0.00            1         3.23                        25   
                                                                                                                          ----------                ----------                ----------   
                                                                                                                                  77                        46                        31                                          
                                                                                                                                                       (59.74)                   (40.26)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE            1386            2252            3638          97.93%
          OTHER              46              31              77           2.07%
                     ----------      ----------      ----------                
                           1432            2283            3715                



[END]
