[BEGIN]

REFERENCE HAIRPIN
*****************************************************************************************************************
ID                 : CLUSTER-598 (mmu-mir-378b)
DESCRIPTION        : CLUSTER-598
CHROMOSOME         : 11
SPAN               : 88166275 - 88166366
LENGTH             : 92
SEQUENCE           : TGTCCTGGGCTATCCCAGTCCAGGCAGTACCCTCAGGAGGCAGGTACGATGGATAGAGAGGGAACCCTGGACTTGGAGTCAGAAGACCTGAG
OVERHANG THRESHOLD : 40%
*****************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : CLUSTER-598
ACCID      : ACC1234
PARENT     : CLUSTER-598
CHROMOSOME : 11
START      : 88166275
STOP       : 88166366
OFFSET     : 67..86
SEQUENCE   : CTGGACTTGGAGTCAGAAGA
STRAND     : +
******************************



*** MATURE ***
____________________________________________________________________________________________
TGTCCTGGGCTATCCCAGTCCAGGCAGTACCCTCAGGAGGCAGGTACGATGGATAGAGAGGGAACCCTGGACTTGGAGTCAGAAGACCTGAG REF                  11                   88166275 - 88166366
                                                                  CTGGACTTGGAGTCAGAAGA       MATURE               11                   88166342 - 88166452  CLUSTER-598          +
____________________________________________________________________________________________

                                                                                        -SEQ-                                         -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-
..................................................................CTGGACTTGGAGTCAGAAGg.......   68670_CTGGACTTGGAGTCAGAAGG_84_69_44_38_38_38       MATURE          311        53.53          197        54.42          114        52.05            g           19
..................................................................CTGGACTTGGAGTCAGAAG........    19403_CTGGACTTGGAGTCAGAAG_32_30_20_14_17_22       MATURE          135        23.24           82        22.65           53        24.20                        19
..................................................................CTGGACTTGGAGTCAGAAGt.......       69875_CTGGACTTGGAGTCAGAAGT_10_14_9_2_5_3       MATURE           43         7.40           33         9.12           10         4.57            t           19
..................................................................CTGGACTTGGAGTCAGAA.........          175358_CTGGACTTGGAGTCAGAA_8_3_2_3_6_1       MATURE           23         3.96           13         3.59           10         4.57                        18
..................................................................CTGGACTTGGAGTCAGA..........           181695_CTGGACTTGGAGTCAGA_1_1_3_1_5_2       MATURE           13         2.24            5         1.38            8         3.65                        17
..................................................................CTGGACTTGGAGTCAGAAa........         234466_CTGGACTTGGAGTCAGAAA_3_1_0_3_1_1       MATURE            9         1.55            4         1.10            5         2.28            a           18
..................................................................CTGGACTTGGAGTCAGAAGtc......       239683_CTGGACTTGGAGTCAGAAGTC_0_2_1_0_0_0       MATURE            3         0.52            3         0.83            0         0.00           tc           19
..................................................................CTGGACTTGGAGTCAGAAtgc......        54572_CTGGACTTGGAGTCAGAATGC_0_1_0_0_0_2       MATURE            3         0.52            1         0.28            2         0.91          tgc           18
..................................................................CTGGACTTGGAGTCAGAAtt.......        295405_CTGGACTTGGAGTCAGAATT_1_1_0_0_1_0       MATURE            3         0.52            2         0.55            1         0.46           tt           18
..................................................................CTGGACTTGGAGTCAGAAaa.......        175577_CTGGACTTGGAGTCAGAAAA_1_0_1_1_0_0       MATURE            3         0.52            2         0.55            1         0.46           aa           18
..................................................................CTGGACTTGGAGTCAGAAaga......       304218_CTGGACTTGGAGTCAGAAAGA_2_0_0_1_0_0       MATURE            3         0.52            2         0.55            1         0.46          aga           18
..................................................................CTGGACTTGGAGTCAGAAGtt......       183517_CTGGACTTGGAGTCAGAAGTT_2_1_0_0_0_0       MATURE            3         0.52            3         0.83            0         0.00           tt           19
..................................................................CTGGACTTGGAGTCAGAAGAa......       164026_CTGGACTTGGAGTCAGAAGAA_1_0_1_1_0_0       MATURE            3         0.52            2         0.55            1         0.46            a           20
...................................................................TGGACTTGGAGTCAGAAG........          405710_TGGACTTGGAGTCAGAAG_0_0_0_1_1_0       MATURE            2         0.34            0         0.00            2         0.91                        18
...................................................................TGGACTTGGAGTCAGAAGt.......         168883_TGGACTTGGAGTCAGAAGT_0_1_0_0_1_0       MATURE            2         0.34            1         0.28            1         0.46            t           18
..................................................................CTGGACTTGGAGTCAGAAt........         287599_CTGGACTTGGAGTCAGAAT_0_0_0_0_1_1       MATURE            2         0.34            0         0.00            2         0.91            t           18
..................................................................CTGGACTTGGAGTCAGAAtg.......        210028_CTGGACTTGGAGTCAGAATG_0_1_1_0_0_0       MATURE            2         0.34            2         0.55            0         0.00           tg           18
..................................................................CTGGACTTGGAGTCAGAAagct.....       59067_CTGGACTTGGAGTCAGAAAGCT_0_0_0_0_1_0       MATURE            1         0.17            0         0.00            1         0.46         agct           18
 ..................................................................aTGGACTTGGAGTCAGAAGgt.....       281332_ATGGACTTGGAGTCAGAAGGT_1_0_0_0_0_0       MATURE            1         0.17            1         0.28            0         0.00           gt           18
...................................................................TGGACTTGGAGTCAGAA.........           382232_TGGACTTGGAGTCAGAA_0_0_0_0_0_1       MATURE            1         0.17            0         0.00            1         0.46                        17
..................................................................CTGGACTTGGAGTCAcAAGA.......        293979_CTGGACTTGGAGTCACAAGA_0_0_1_0_0_0       MATURE            1         0.17            1         0.28            0         0.00                      15C4
..................................................................CTGGACTTGGAGTCAGAAtgct.....       79478_CTGGACTTGGAGTCAGAATGCT_1_0_0_0_0_0       MATURE            1         0.17            1         0.28            0         0.00         tgct           18
...................................................................TGGACTTGGAGTCAGAAGgaa.....       188768_TGGACTTGGAGTCAGAAGGAA_0_0_1_0_0_0       MATURE            1         0.17            1         0.28            0         0.00          gaa           18
..................................................................CTGGACTTGGAGTCAGAAGAt......       244566_CTGGACTTGGAGTCAGAAGAT_0_0_0_1_0_0       MATURE            1         0.17            0         0.00            1         0.46            t           20
..................................................................CTGGACTTGGAGTCAGAAGAgt.....      117468_CTGGACTTGGAGTCAGAAGAGT_0_1_0_0_0_0       MATURE            1         0.17            1         0.28            0         0.00           gt           20
..................................................................CTGGACTTGGAGTCAGAAcgca.....      224337_CTGGACTTGGAGTCAGAACGCA_1_0_0_0_0_0       MATURE            1         0.17            1         0.28            0         0.00         cgca           18
..................................................................CTGGACTTGGAGTCAGAAcgc......       347529_CTGGACTTGGAGTCAGAACGC_0_0_0_0_0_1       MATURE            1         0.17            0         0.00            1         0.46          cgc           18
...................................................................TGGACTTGGAGTCAGAAGA.......         321202_TGGACTTGGAGTCAGAAGA_0_1_0_0_0_0       MATURE            1         0.17            1         0.28            0         0.00                        19
..................................................................CTGGACTTtGAGTCAGAAGA.......        367231_CTGGACTTTGAGTCAGAAGA_0_0_1_0_0_0       MATURE            1         0.17            1         0.28            0         0.00                      8T11
..................................................................CTGGACTTGGAGTCAGAAGtat.....      183904_CTGGACTTGGAGTCAGAAGTAT_0_0_1_0_0_0       MATURE            1         0.17            1         0.28            0         0.00          tat           19
...................................................................TGGACTTGGAGTCAGAAGgaaa....      117318_TGGACTTGGAGTCAGAAGGAAA_1_0_0_0_0_0       MATURE            1         0.17            1         0.28            0         0.00         gaaa           18
..................................................................CTGGACTTGGAGTCAGAAaaa......       410730_CTGGACTTGGAGTCAGAAAAA_0_0_0_0_1_0       MATURE            1         0.17            0         0.00            1         0.46          aaa           18
..................................................................CTGGACTTGGAGTCAGAAGttt.....      362536_CTGGACTTGGAGTCAGAAGTTT_0_0_0_1_0_0       MATURE            1         0.17            0         0.00            1         0.46          ttt           19
..................................................................CTGGACTTGGAGTCAGAAcg.......        403578_CTGGACTTGGAGTCAGAACG_0_0_0_1_0_0       MATURE            1         0.17            0         0.00            1         0.46           cg           18
..................................................................CTGGACTTGGAGTCAGAAGtac.....      121100_CTGGACTTGGAGTCAGAAGTAC_0_0_0_0_0_1       MATURE            1         0.17            0         0.00            1         0.46          tac           19
                                                                                                                                                            ----------                ----------                ----------
                                                                                                                                                                   581                       362                       219
                                                                                                                                                                                         (62.31)                   (37.69)




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE             362             219             581         100.00%
                     ----------      ----------      ----------
                            362             219             581



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