[BEGIN]
REFERENCE HAIRPIN
***************************************************************************************
ID : CLUSTER-393 (mmu-mir-1843b)
DESCRIPTION : CLUSTER-393
CHROMOSOME : 1
SPAN : 161270489 - 161270554
LENGTH : 66
SEQUENCE : CAACATGGAGGTCTCTGTCTGACTTAGGATAGCTGGCTAAGTCCGATCGTTCCCCTCCATACAACC
OVERHANG THRESHOLD : 40%
***************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : CLUSTER-393
ACCID : ACC1234
PARENT : CLUSTER-393
CHROMOSOME : 1
START : 161270489
STOP : 161270554
OFFSET : 4..25
SEQUENCE : CATGGAGGTCTCTGTCTGACTT
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : CLUSTER-393*
ACCID : ACC1234
PARENT : CLUSTER-393
CHROMOSOME : 1
START : 161270489
STOP : 161270554
OFFSET : 42..60
SEQUENCE : TCCGATCGTTCCCCTCCAT
STRAND : +
******************************
*** MATURE ***
__________________________________________________________________
CAACATGGAGGTCTCTGTCTGACTTAGGATAGCTGGCTAAGTCCGATCGTTCCCCTCCATACAACC REF 1 161270489 - 161270554
CATGGAGGTCTCTGTCTGACTT MATURE 1 161270493 - 161270579 CLUSTER-393 +
TCCGATCGTTCCCCTCCAT MATURESTAR 1 161270531 - 161270614 CLUSTER-393* +
__________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
....ATGGAGGTCTCTGTCTGACTTt......................................... 192969_ATGGAGGTCTCTGTCTGACTTT_28_19_13_7_11_13 MATURE 91 23.21 60 22.81 31 24.03 t 21
....ATGGAGGTCTCTGTCTGACT........................................... 327900_ATGGAGGTCTCTGTCTGACT_20_27_16_7_11_10 MATURE 91 23.21 63 23.95 28 21.71 20
....ATGGAGGTCTCTGTCTGACTT.......................................... 339998_ATGGAGGTCTCTGTCTGACTT_10_14_9_5_5_8 MATURE 51 13.01 33 12.55 18 13.95 21
....ATGGAGGTCTCTGTCTGACTTA......................................... 375321_ATGGAGGTCTCTGTCTGACTTA_7_6_7_0_0_2 MATURE 22 5.61 20 7.60 2 1.55 22
....ATGGAGGTCTCTGTCTGAC............................................ 393062_ATGGAGGTCTCTGTCTGAC_7_4_4_4_3_0 MATURE 22 5.61 15 5.70 7 5.43 19
....ATGGAGGTCTCTGTCTGA............................................. 295207_ATGGAGGTCTCTGTCTGA_5_7_5_0_2_1 MATURE 20 5.10 17 6.46 3 2.33 18
....ATGGAGGTCTCTGTCTGACa........................................... 115534_ATGGAGGTCTCTGTCTGACA_1_2_2_0_2_0 MATURE 7 1.79 5 1.90 2 1.55 a 19
....ATGGAGGTCTCTGTCTGAt............................................ 247181_ATGGAGGTCTCTGTCTGAT_0_1_0_1_1_1 MATURE 4 1.02 1 0.38 3 2.33 t 18
....ATGGAGGTCTCTGTCTGACTTtt........................................ 180918_ATGGAGGTCTCTGTCTGACTTTT_1_1_1_1_0_0 MATURE 4 1.02 3 1.14 1 0.78 tt 21
...CATGGAGGTCTCTGTCTGA............................................. 199415_CATGGAGGTCTCTGTCTGA_0_0_1_2_1_0 MATURE 4 1.02 1 0.38 3 2.33 19
....ATGGAGGTCTCTGTCTGACTTAt........................................ 248064_ATGGAGGTCTCTGTCTGACTTAT_0_0_1_1_1_1 MATURE 4 1.02 1 0.38 3 2.33 t 22
....ATGGAGGTCTCTGTCTGACTat......................................... 277133_ATGGAGGTCTCTGTCTGACTAT_0_1_2_1_0_0 MATURE 4 1.02 3 1.14 1 0.78 at 20
....ATGGAGGTCTCTGTCTGAaa........................................... 82857_ATGGAGGTCTCTGTCTGAAA_2_0_1_0_0_0 MATURE 3 0.77 3 1.14 0 0.00 aa 18
....ATGGAGGTCTCTGTCTGACTTAa........................................ 285495_ATGGAGGTCTCTGTCTGACTTAA_2_0_0_0_1_0 MATURE 3 0.77 2 0.76 1 0.78 a 22
....ATGGAGGTCTCTGTCTGACTTgt........................................ 84154_ATGGAGGTCTCTGTCTGACTTGT_0_2_0_1_0_0 MATURE 3 0.77 2 0.76 1 0.78 gt 21
....ATGGAGGTCTCTGTCTGACTaa......................................... 121516_ATGGAGGTCTCTGTCTGACTAA_0_2_0_1_0_0 MATURE 3 0.77 2 0.76 1 0.78 aa 20
....ATGGAGGTCTCTGTCTGAa............................................ 201670_ATGGAGGTCTCTGTCTGAA_0_0_0_1_1_1 MATURE 3 0.77 0 0.00 3 2.33 a 18
....ATGGAGGTCTCTGTCTGACTTg......................................... 60338_ATGGAGGTCTCTGTCTGACTTG_0_1_1_0_1_0 MATURE 3 0.77 2 0.76 1 0.78 g 21
....ATGGAGGTCTCTGTCTGACTa.......................................... 24522_ATGGAGGTCTCTGTCTGACTA_1_1_1_0_0_0 MATURE 3 0.77 3 1.14 0 0.00 a 20
....ATGGAGGTCTCTGTCTGACTTta........................................ 114176_ATGGAGGTCTCTGTCTGACTTTA_0_0_1_0_1_1 MATURE 3 0.77 1 0.38 2 1.55 ta 21
....ATGGAGGTCTCTGTCTtACTT.......................................... 192181_ATGGAGGTCTCTGTCTTACTT_0_2_0_0_0_0 MATURE 2 0.51 2 0.76 0 0.00 16T4
...CATGGAGGTCTCTGTCTGAC............................................ 276668_CATGGAGGTCTCTGTCTGAC_1_0_0_0_0_1 MATURE 2 0.51 1 0.38 1 0.78 20
....ATGGAGGTCTCTGTCTGACat.......................................... 241036_ATGGAGGTCTCTGTCTGACAT_0_1_0_0_0_1 MATURE 2 0.51 1 0.38 1 0.78 at 19
....ATcGAGGTCTCTGTCTGACTT.......................................... 152452_ATCGAGGTCTCTGTCTGACTT_0_0_0_2_0_0 MATURE 2 0.51 0 0.00 2 1.55 2C18
....ATGGAGGTCTCTGTCTGAtTT.......................................... 308064_ATGGAGGTCTCTGTCTGATTT_0_1_0_0_1_0 MATURE 2 0.51 1 0.38 1 0.78 18T2
....ATGGAGGTCTCTGTCTtACT........................................... 109_ATGGAGGTCTCTGTCTTACT_0_1_0_0_1_0 MATURE 2 0.51 1 0.38 1 0.78 16T3
....ATGtAGGTCTCTGTCTGACT........................................... 273458_ATGTAGGTCTCTGTCTGACT_0_1_0_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 3T16
....ATGGAGGTCTCTGTCTGAat........................................... 192117_ATGGAGGTCTCTGTCTGAAT_0_0_0_1_0_0 MATURE 1 0.26 0 0.00 1 0.78 at 18
....ATGGAGGTaTCTGTCTGACTTAt........................................ 35054_ATGGAGGTATCTGTCTGACTTAT_0_0_1_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 t 8A13
....ATGGAGGTCTCTGTaTGACTTAt........................................ 407624_ATGGAGGTCTCTGTATGACTTAT_1_0_0_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 t 14A7
....ATGGAGGTCTCTcTCTGACTTA......................................... 242494_ATGGAGGTCTCTCTCTGACTTA_0_0_1_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 12C9
......GGAGGTCTCTGTCTGACTTt......................................... 201253_GGAGGTCTCTGTCTGACTTT_0_0_1_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 t 19
....ATGGAGGTCTCTGTCTtACTTAt........................................ 257572_ATGGAGGTCTCTGTCTTACTTAT_0_1_0_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 t 16T5
....ATGGAGGTaTCTGTCTGACTTt......................................... 162572_ATGGAGGTATCTGTCTGACTTT_0_1_0_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 t 8A12
....ATGGAGGTCTCTGTCTGACaaa......................................... 106563_ATGGAGGTCTCTGTCTGACAAA_0_0_0_0_1_0 MATURE 1 0.26 0 0.00 1 0.78 aaa 19
....ATGGAGGTtTCTGTCTGACT........................................... 1757_ATGGAGGTTTCTGTCTGACT_0_0_0_0_1_0 MATURE 1 0.26 0 0.00 1 0.78 8T11
....ATGGAGGTCTCTGTCTGtCTTt......................................... 383787_ATGGAGGTCTCTGTCTGTCTTT_0_0_0_0_1_0 MATURE 1 0.26 0 0.00 1 0.78 t 17T3
....ATGGAGGTCTCTGTCTGtCT........................................... 22828_ATGGAGGTCTCTGTCTGTCT_0_1_0_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 17T2
....ATGGAGGTCTCTaTCTGACTTt......................................... 20917_ATGGAGGTCTCTATCTGACTTT_1_0_0_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 t 12A8
....ATGGAGGTCTCTGTaTGACT........................................... 372676_ATGGAGGTCTCTGTATGACT_0_0_0_0_0_1 MATURE 1 0.26 0 0.00 1 0.78 14A5
....ATGGAtGTCTCTGTCTGACT........................................... 118941_ATGGATGTCTCTGTCTGACT_0_1_0_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 5T14
...CATGGAGGTCTCTGTCTGACa........................................... 163148_CATGGAGGTCTCTGTCTGACA_0_0_0_0_0_1 MATURE 1 0.26 0 0.00 1 0.78 a 20
....ATGGAGGTCTCTGTCTGcCTT.......................................... 400562_ATGGAGGTCTCTGTCTGCCTT_0_0_0_0_1_0 MATURE 1 0.26 0 0.00 1 0.78 17C3
....ATGGAGGTCcCTGTCTGACTTt......................................... 361865_ATGGAGGTCCCTGTCTGACTTT_0_1_0_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 t 9C11
....ATGGAGGTCTCTGTCTGACTga......................................... 405875_ATGGAGGTCTCTGTCTGACTGA_1_0_0_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 ga 20
....ATGGAGGTCTCTGTaTGACTT.......................................... 103453_ATGGAGGTCTCTGTATGACTT_0_0_1_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 14A6
....ATGGAGcTCTCTGTCTGACTT.......................................... 231979_ATGGAGCTCTCTGTCTGACTT_0_0_0_0_1_0 MATURE 1 0.26 0 0.00 1 0.78 6C14
....ATGGAGGTCTCTGgCTGACTTt......................................... 321550_ATGGAGGTCTCTGGCTGACTTT_0_0_1_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 t 13G7
....ATGGAGGTCTCTGTCTGACg........................................... 404760_ATGGAGGTCTCTGTCTGACG_0_1_0_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 g 19
....ATGGAGGTCTCTGcCTGACT........................................... 333580_ATGGAGGTCTCTGCCTGACT_0_1_0_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 13C6
....ATGGAGGTCTCTGTCTGACTTtg........................................ 203059_ATGGAGGTCTCTGTCTGACTTTG_0_0_0_0_0_1 MATURE 1 0.26 0 0.00 1 0.78 tg 21
....ATGGAGGTCTCTGTCTGtCTT.......................................... 370944_ATGGAGGTCTCTGTCTGTCTT_0_0_1_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 17T3
....ATGGAGGTCTCTGTCTGACcat......................................... 170662_ATGGAGGTCTCTGTCTGACCAT_0_0_0_0_1_0 MATURE 1 0.26 0 0.00 1 0.78 cat 19
....ATGGAGGTCTCTGTgTGACT........................................... 117807_ATGGAGGTCTCTGTGTGACT_1_0_0_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 14G5
....ATGGgGGTCTCTGTCTGACTTt......................................... 290515_ATGGGGGTCTCTGTCTGACTTT_0_0_1_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 t 4G16
....ATGGAGGTCTCTGTCcGACTTt......................................... 395861_ATGGAGGTCTCTGTCCGACTTT_0_0_1_0_0_0 MATURE 1 0.26 1 0.38 0 0.00 t 15C5
....ATGGAGGTCTCTGTCTGgCTTt......................................... 124718_ATGGAGGTCTCTGTCTGGCTTT_0_0_0_0_0_1 MATURE 1 0.26 0 0.00 1 0.78 t 17G3
....ATGGAGGTCTCTGTCTGgCT........................................... 298494_ATGGAGGTCTCTGTCTGGCT_0_0_0_0_0_1 MATURE 1 0.26 0 0.00 1 0.78 17G2
---------- ---------- ----------
392 263 129
(67.09) (32.91)
*** MATURESTAR ***
__________________________________________________________________
CAACATGGAGGTCTCTGTCTGACTTAGGATAGCTGGCTAAGTCCGATCGTTCCCCTCCATACAACC REF 1 161270489 - 161270554
CATGGAGGTCTCTGTCTGACTT MATURE 1 161270493 - 161270579 CLUSTER-393 +
TCCGATCGTTCCCCTCCAT MATURESTAR 1 161270531 - 161270614 CLUSTER-393* +
__________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..........................................CCGATCGTTCCCCTCCAT....... 342293_CCGATCGTTCCCCTCCAT_0_0_1_0_0_0 MATURESTAR 1 25.00 1 50.00 0 0.00 18
..........................................CCGATCGTTCCCCTCCATA...... 257064_CCGATCGTTCCCCTCCATA_0_0_0_0_0_1 MATURESTAR 1 25.00 0 0.00 1 50.00 19
..........................................CCGATCGTTCCCCTCCATACA.... 379571_CCGATCGTTCCCCTCCATACA_1_0_0_0_0_0 MATURESTAR 1 25.00 1 50.00 0 0.00 21
..........................................CCGATCGTTCCCCTCtATAC..... 80132_CCGATCGTTCCCCTCTATAC_0_0_0_1_0_0 MATURESTAR 1 25.00 0 0.00 1 50.00 15T4
---------- ---------- ----------
4 2 2
(50.00) (50.00)
*** OTHER ***
__________________________________________________________________
CAACATGGAGGTCTCTGTCTGACTTAGGATAGCTGGCTAAGTCCGATCGTTCCCCTCCATACAACC REF 1 161270489 - 161270554
CATGGAGGTCTCTGTCTGACTT MATURE 1 161270493 - 161270579 CLUSTER-393 +
TCCGATCGTTCCCCTCCAT MATURESTAR 1 161270531 - 161270614 CLUSTER-393* +
__________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..........................GGATAGCTGGCTAAGTCC....................... 154912_GGATAGCTGGCTAAGTCC_0_0_0_0_1_0 OTHER 1 100.00 0 0 1 100.00 18
---------- ---------- ----------
1 0 1
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 263 129 392 98.74%
MATURESTAR 2 2 4 1.01%
OTHER 0 1 1 0.25%
---------- ---------- ----------
265 132 397
[END]