[BEGIN]
REFERENCE HAIRPIN
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ID : CLUSTER-1017 (mmu-mir-28b)
DESCRIPTION : CLUSTER-1017
CHROMOSOME : 8
SPAN : 75540411 - 75540490
LENGTH : 80
SEQUENCE : GACTATAGAAAAGGAGCTCACAATCTATTTAGTGGCAGGCGCACACTGCCAGAATGTGTGAGGCATCTTAATAGTGTGCT
OVERHANG THRESHOLD : 40%
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TARGET
******************************
CATEGORY : MATURE
ID : CLUSTER-1017
ACCID : ACC1234
PARENT : CLUSTER-1017
CHROMOSOME : 8
START : 75540411
STOP : 75540490
OFFSET : 12..32
SEQUENCE : AGGAGCTCACAATCTATTTAG
STRAND : +
******************************
*** MATURE ***
________________________________________________________________________________
GACTATAGAAAAGGAGCTCACAATCTATTTAGTGGCAGGCGCACACTGCCAGAATGTGTGAGGCATCTTAATAGTGTGCT REF 8 75540411 - 75540490
AGGAGCTCACAATCTATTTAG MATURE 8 75540423 - 75540522 CLUSTER-1017 +
________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........AGGAGCTCACAgTCTATTTAG................................................. 128397_AGGAGCTCACAGTCTATTTAG_10_17_15_10_13_18 MATURE 83 56.46 42 53.85 41 59.42 11G9
...........AGGAGCTCACAgTCTATTTA.................................................. 226607_AGGAGCTCACAGTCTATTTA_5_14_6_3_8_11 MATURE 47 31.97 25 32.05 22 31.88 11G8
...........AGGAGCTCACAgTCTATTTAGT................................................ 228005_AGGAGCTCACAGTCTATTTAGT_1_5_2_1_1_1 MATURE 11 7.48 8 10.26 3 4.35 11G10
...........AGGAGCTCACAgTCTATTTAGa................................................ 277849_AGGAGCTCACAGTCTATTTAGA_0_0_1_0_1_1 MATURE 3 2.04 1 1.28 2 2.90 a 11G9
..........AAGGAGCTCACAgTCTATTTAGT................................................ 293870_AAGGAGCTCACAGTCTATTTAGT_0_1_0_0_0_0 MATURE 1 0.68 1 1.28 0 0.00 12G10
...........AGGAGCTCACAgTCTATTTAGat............................................... 367905_AGGAGCTCACAGTCTATTTAGAT_0_0_0_1_0_0 MATURE 1 0.68 0 0.00 1 1.45 at 11G9
...........AGGAGCTCACAgTCTATTTAGaa............................................... 192761_AGGAGCTCACAGTCTATTTAGAA_0_1_0_0_0_0 MATURE 1 0.68 1 1.28 0 0.00 aa 11G9
---------- ---------- ----------
147 78 69
(53.06) (46.94)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 78 69 147 100.00%
---------- ---------- ----------
78 69 147
[END]