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================================================================================
NOTE:
Reference is presented 5'-->3' for consistency; sequence is - strand alignment.
================================================================================
REFERENCE HAIRPIN
*****************************************************************************************************************
ID : CLUSTER-914 (mmu-mir-3969)
DESCRIPTION : CLUSTER-914
CHROMOSOME : 5
SPAN : 88024927 - 88025018
LENGTH : 92
SEQUENCE : AGATCTGAAGCCCTGTAAGTAGCTAATCTAAATTCTAGTCCTCTGTAACCATGCAACTCTATAGTGATTTCTACTTTAGGGGAAATCCATTT
OVERHANG THRESHOLD : 40%
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TARGET
******************************
CATEGORY : MATURE
ID : CLUSTER-914
ACCID : ACC1234
PARENT : CLUSTER-914
CHROMOSOME : 5
START : 88024927
STOP : 88025018
OFFSET : 62..81
SEQUENCE : TAGTGATTTCTACTTTAGGG
STRAND : -
******************************
*** MATURE ***
____________________________________________________________________________________________
AGATCTGAAGCCCTGTAAGTAGCTAATCTAAATTCTAGTCCTCTGTAACCATGCAACTCTATAGTGATTTCTACTTTAGGGGAAATCCATTT REF 5 88024927 - 88025018
TAGTGATTTCTACTTTAGGG MATURE 5 88024989 - 88025099 CLUSTER-914 -
____________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............................................................TAGTGATTTCTACTTTAtGG............ 40906_CCATAAAGTAGAAATCACTA_39_3_1_0_4_4 MATURE 51 53.68 43 57.33 8 40.00 2A17
............................................................ATAGTGATTTCTACTTTAtGG............ 115512_CCATAAAGTAGAAATCACTAT_3_1_3_0_0_1 MATURE 8 8.42 7 9.33 1 5.00 2A18
.............................................................TAGTGcTTTCTACTTTAGGG............ 409120_CCCTAAAGTAGAAAGCACTA_5_1_0_0_1_1 MATURE 8 8.42 6 8.00 2 10.00 14G5
.............................................................TAGTGATTTCTACTTTAtGGG........... 390327_CCCATAAAGTAGAAATCACTA_0_1_4_0_0_2 MATURE 7 7.37 5 6.67 2 10.00 3A17
...........................................................agTAGTGATTTCTACTTTAG.............. 174681_CTAAAGTAGAAATCACTACT_0_3_0_0_0_1 MATURE 4 4.21 3 4.00 1 5.00 ag 18
..............................................................AGTGATTTCTACTTTAtGGG........... 22641_CCCATAAAGTAGAAATCACT_0_2_0_1_0_1 MATURE 4 4.21 2 2.67 2 10.00 3A16
..............................................................AGTGcTTTCTACTTTAGGGG........... 315245_CCCCTAAAGTAGAAAGCACT_1_0_1_0_0_1 MATURE 3 3.16 2 2.67 1 5.00 15G4
............................................................ATAGTGcTTTCTACTTTAGGG............ 19129_CCCTAAAGTAGAAAGCACTAT_0_1_1_0_0_0 MATURE 2 2.11 2 2.67 0 0.00 14G6
...........................................................ggTAGTGcTTTCTACTTTAGGGG........... 349376_CCCCTAAAGTAGAAAGCACTACC_1_0_0_0_0_0 MATURE 1 1.05 1 1.33 0 0.00 gg 15G5
..........................................................tagTAGTGATTTCTACTTTAG.............. 93638_CTAAAGTAGAAATCACTACTA_0_0_0_0_0_1 MATURE 1 1.05 0 0.00 1 5.00 tag 18
............................................................gTAGTGATTTCTACTTTAGGG............ 383290_CCCTAAAGTAGAAATCACTAC_0_0_0_0_1_0 MATURE 1 1.05 0 0.00 1 5.00 g 20
...........................................................aATAGTGATTTCTACTTTAtGG............ 385709_CCATAAAGTAGAAATCACTATT_1_0_0_0_0_0 MATURE 1 1.05 1 1.33 0 0.00 a 2A18
.............................................................TAGTGATTTCTACTTTAG.............. 43865_CTAAAGTAGAAATCACTA_0_1_0_0_0_0 MATURE 1 1.05 1 1.33 0 0.00 18
............................................................gaAGTGATTTCTACTTTAGGG............ 184744_CCCTAAAGTAGAAATCACTTC_0_0_0_0_0_1 MATURE 1 1.05 0 0.00 1 5.00 ga 19
............................................................ATAGTGATTTCTACTTTAt.............. 382409_ATAAAGTAGAAATCACTAT_0_0_1_0_0_0 MATURE 1 1.05 1 1.33 0 0.00 18
...........................................................aATAGTGATTTCTACTTTAt.............. 354368_ATAAAGTAGAAATCACTATT_0_1_0_0_0_0 MATURE 1 1.05 1 1.33 0 0.00 a 18
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95 75 20
(78.95) (21.05)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
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MATURE 75 20 95 100.00%
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75 20 95
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