[BEGIN]
REFERENCE HAIRPIN
*******************************************************************************************
ID : mmu-mir-99b
DESCRIPTION : mmu-mir-99b MI0000147 Mus musculus miR-99b stem-loop
CHROMOSOME : 17
SPAN : 17967152 - 17967221
LENGTH : 70
SEQUENCE : GGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCACACAAGCTCGTGTCTGTGGGTCCGTGTC
OVERHANG THRESHOLD : 75%
*******************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-99b
ACCID : MI0000147
PARENT : mmu-mir-99b
CHROMOSOME : 17
START : 17967152
STOP : 17967221
OFFSET : 7..28
SEQUENCE : CACCCGTAGAACCGACCTTGCG
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-99b*
ACCID : MI0000147
PARENT : mmu-mir-99b
CHROMOSOME : 17
START : 17967152
STOP : 17967221
OFFSET : 45..66
SEQUENCE : CAAGCTCGTGTCTGTGGGTCCG
STRAND : +
******************************
*** MATURE ***
______________________________________________________________________
GGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCACACAAGCTCGTGTCTGTGGGTCCGTGTC REF 17 17967152 - 17967221
CACCCGTAGAACCGACCTTGCG MATURE 17 17967159 - 17967249 mmu-miR-99b +
CAAGCTCGTGTCTGTGGGTCCG MATURESTAR 17 17967197 - 17967287 mmu-miR-99b* +
______________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......ACCCGTAGAACCGACCTTGCG........................................... read_124263_11_19_10_7_4_7 MATURE 58 36.48 40 35.71 18 38.30 21
.......ACCCGTAGAACCGACCTTGC............................................ read_266001_7_10_5_4_4_4 MATURE 34 21.38 22 19.64 12 25.53 20
.......ACCCGTAGAACCGACCTTGCGt.......................................... read_371403_4_5_6_0_1_1 MATURE 17 10.69 15 13.39 2 4.26 t 21
.......ACCCGTAGAACCGACCTTG............................................. read_396657_2_3_1_1_2_1 MATURE 10 6.29 6 5.36 4 8.51 19
.......ACCCGTAGAACCGACCTTGCGtt......................................... read_162641_0_2_1_0_0_0 MATURE 3 1.89 3 2.68 0 0.00 tt 21
.......ACCCGTAGAACCGACCTTGCGa.......................................... read_117254_1_0_0_0_1_1 MATURE 3 1.89 1 0.89 2 4.26 a 21
.......cCCCGTAGAACCGACCTTGC............................................ read_70392_0_0_0_1_1_0 MATURE 2 1.26 0 0.00 2 4.26 19
.......ACCCGTAGAACCGAaCTTGCG........................................... read_337156_0_1_0_0_1_0 MATURE 2 1.26 1 0.89 1 2.13 14A6
.......ACCCGTAGAACCGACCTT.............................................. read_394434_0_1_0_0_1_0 MATURE 2 1.26 1 0.89 1 2.13 18
.......ACCCGTAGAACaGACCTTGCG........................................... read_300959_0_1_1_0_0_0 MATURE 2 1.26 2 1.79 0 0.00 11A9
.......ACCCGTAGAACCGACaTTGCG........................................... read_218811_2_0_0_0_0_0 MATURE 2 1.26 2 1.79 0 0.00 15A5
.......ACCCGTAGAACCGACCTTtc............................................ read_105231_0_2_0_0_0_0 MATURE 2 1.26 2 1.79 0 0.00 tc 18
.......ACCCGTAGAACCGACCTTGCa........................................... read_34211_1_1_0_0_0_0 MATURE 2 1.26 2 1.79 0 0.00 a 20
.......ACCCGTAGAACCGAaCTTGC............................................ read_115871_1_0_0_0_0_1 MATURE 2 1.26 1 0.89 1 2.13 14A5
........CCCGTAGAACCGACCTTGCG........................................... read_69374_0_0_0_0_1_0 MATURE 1 0.63 0 0.00 1 2.13 20
.......ACCCGTAGAACCGAtCTTGCG........................................... read_50424_0_1_0_0_0_0 MATURE 1 0.63 1 0.89 0 0.00 14T6
.......ACCCGTAGAACCGAgCTTGCG........................................... read_276005_1_0_0_0_0_0 MATURE 1 0.63 1 0.89 0 0.00 14G6
.......ACCCGTAGAACCGACtTTGC............................................ read_271752_0_0_1_0_0_0 MATURE 1 0.63 1 0.89 0 0.00 15T4
.......ACCCGTAGAACCGACCTTcc............................................ read_381739_0_0_0_1_0_0 MATURE 1 0.63 0 0.00 1 2.13 cc 18
.......ACCCGTAGAACCGACCTTaca........................................... read_366462_0_1_0_0_0_0 MATURE 1 0.63 1 0.89 0 0.00 aca 18
.......ACCCGTAGAACtGACCTTGC............................................ read_224890_0_1_0_0_0_0 MATURE 1 0.63 1 0.89 0 0.00 11T8
.......ACCCaTAGAACCGACCTTGCG........................................... read_104744_0_1_0_0_0_0 MATURE 1 0.63 1 0.89 0 0.00 4A16
.......ACCCGTAGAACCGtCCTTGCG........................................... read_343852_0_0_0_0_0_1 MATURE 1 0.63 0 0.00 1 2.13 13T7
.......ACCCGTAGAACCGACCTTGa............................................ read_123062_0_1_0_0_0_0 MATURE 1 0.63 1 0.89 0 0.00 a 19
.......ACCCGTAGAAtCGACCTTGC............................................ read_409040_0_1_0_0_0_0 MATURE 1 0.63 1 0.89 0 0.00 10T9
.......ACCCGTAGAACCGACCTTGCGGat........................................ read_133949_0_0_0_1_0_0 MATURE 1 0.63 0 0.00 1 2.13 at 22
.......ACCCGTAGAACCGACCTaGCG........................................... read_383623_0_1_0_0_0_0 MATURE 1 0.63 1 0.89 0 0.00 17A3
.......ACCCGTAGAACCGAtCTTGCGt.......................................... read_121868_1_0_0_0_0_0 MATURE 1 0.63 1 0.89 0 0.00 t 14T6
.......ACCCGTAGAACCGAaCTTGCGa.......................................... read_388973_1_0_0_0_0_0 MATURE 1 0.63 1 0.89 0 0.00 a 14A6
.......ACCCGTAGAACCGgCCTTGC............................................ read_122066_0_0_1_0_0_0 MATURE 1 0.63 1 0.89 0 0.00 13G6
.......ACCCGTAGAACCGACCTTGCGta......................................... read_338365_1_0_0_0_0_0 MATURE 1 0.63 1 0.89 0 0.00 ta 21
.......ACCCGTAGAACCGACCTTGtga.......................................... read_52982_0_1_0_0_0_0 MATURE 1 0.63 1 0.89 0 0.00 tga 19
---------- ---------- ----------
159 112 47
(70.44) (29.56)
*** MATURESTAR ***
______________________________________________________________________
GGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCACACAAGCTCGTGTCTGTGGGTCCGTGTC REF 17 17967152 - 17967221
CACCCGTAGAACCGACCTTGCG MATURE 17 17967159 - 17967249 mmu-miR-99b +
CAAGCTCGTGTCTGTGGGTCCG MATURESTAR 17 17967197 - 17967287 mmu-miR-99b* +
______________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............................................AAGCTCGTGTCTGTGGGTCCG..... read_97919_0_0_0_0_0_1 MATURESTAR 1 100.00 0 0 1 100.00 21
---------- ---------- ----------
1 0 1
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 112 47 159 99.38%
MATURESTAR 0 1 1 0.62%
---------- ---------- ----------
112 48 160
[END]