[BEGIN]
REFERENCE HAIRPIN
**************************************************************************************
ID : mmu-mir-99a
DESCRIPTION : mmu-mir-99a MI0000146 Mus musculus miR-99a stem-loop
CHROMOSOME : 16
SPAN : 77599181 - 77599245
LENGTH : 65
SEQUENCE : CATAAACCCGTAGATCCGATCTTGTGGTGAAGTGGACCGCGCAAGCTCGTTTCTATGGGTCTGTG
OVERHANG THRESHOLD : 75%
**************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-99a
ACCID : MI0000146
PARENT : mmu-mir-99a
CHROMOSOME : 16
START : 77599181
STOP : 77599245
OFFSET : 5..26
SEQUENCE : AACCCGTAGATCCGATCTTGTG
STRAND : +
******************************
*** MATURE ***
_________________________________________________________________
CATAAACCCGTAGATCCGATCTTGTGGTGAAGTGGACCGCGCAAGCTCGTTTCTATGGGTCTGTG REF 16 77599181 - 77599245
AACCCGTAGATCCGATCTTGTG MATURE 16 77599186 - 77599271 mmu-miR-99a +
_________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.....ACCCGTAGATCCGATCTTGT......................................... read_395447_2_3_1_1_3_1 MATURE 11 25.00 6 18.18 5 45.45 20
.....ACCCGTAGATCCGATCTTGTG........................................ read_150527_3_3_3_1_0_0 MATURE 10 22.73 9 27.27 1 9.09 21
.....ACCCGTAGATCCGATCTTGTGt....................................... read_368600_1_5_2_0_1_1 MATURE 10 22.73 8 24.24 2 18.18 t 21
.....ACCCGTAGATCCGATCTTG.......................................... read_171855_1_3_0_0_0_2 MATURE 6 13.64 4 12.12 2 18.18 19
.....ACCCGTAGATCCGATCTT........................................... read_309297_1_1_0_0_0_0 MATURE 2 4.55 2 6.06 0 0.00 18
.....ACCCGTAGATCCGATCTTGTGa....................................... read_177728_1_1_0_0_0_0 MATURE 2 4.55 2 6.06 0 0.00 a 21
.....ACCCGTAGATCCGATCTTGTGaa...................................... read_72254_0_1_0_0_0_0 MATURE 1 2.27 1 3.03 0 0.00 aa 21
.....ACCCGTAGATCtGATCTTGT......................................... read_84126_0_0_0_0_0_1 MATURE 1 2.27 0 0.00 1 9.09 11T8
.....ACCCGTAGATCCGATCT............................................ read_225683_0_1_0_0_0_0 MATURE 1 2.27 1 3.03 0 0.00 17
---------- ---------- ----------
44 33 11
(75.00) (25.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 33 11 44 100.00%
---------- ---------- ----------
33 11 44
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