[BEGIN]
REFERENCE HAIRPIN
*******************************************************************************************************************************
ID : mmu-mir-96
DESCRIPTION : mmu-mir-96 MI0000583 Mus musculus miR-96 stem-loop
CHROMOSOME : 6
SPAN : 30119446 - 30119551
LENGTH : 106
SEQUENCE : CCAGTACCATCTGCTTGGCCGATTTTGGCACTAGCACATTTTTGCTTGTGTCTCTCCGCTGTGAGCAATCATGTGTAGTGCCAATATGGGAAAAGCGGGCTGCTGC
OVERHANG THRESHOLD : 75%
*******************************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-96
ACCID : MI0000583
PARENT : mmu-mir-96
CHROMOSOME : 6
START : 30119446
STOP : 30119551
OFFSET : 24..46
SEQUENCE : TTTGGCACTAGCACATTTTTGCT
STRAND : -
******************************
*** MATURE ***
__________________________________________________________________________________________________________
CCAGTACCATCTGCTTGGCCGATTTTGGCACTAGCACATTTTTGCTTGTGTCTCTCCGCTGTGAGCAATCATGTGTAGTGCCAATATGGGAAAAGCGGGCTGCTGC REF 6 30119446 - 30119551
TTTGGCACTAGCACATTTTTGCT MATURE 6 30119470 - 30119597 mmu-miR-96 -
__________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
........................TTGGCACTAGCACATTTTTGCT............................................................. read_173265_2_0_2_0_3_2 MATURE 9 60.00 4 50.00 5 71.43 22
........................TTGGCACTAGCACATTTTTG............................................................... read_155272_1_0_1_0_1_0 MATURE 3 20.00 2 25.00 1 14.29 20
........................TTGGCACTAGCACATTTTTGCTT............................................................ read_5476_0_1_0_0_0_0 MATURE 1 6.67 1 12.50 0 0.00 23
........................TTGGCgCTAGCACATTTTTGCT............................................................. read_183807_0_0_0_1_0_0 MATURE 1 6.67 0 0.00 1 14.29 5G16
........................TTGGCACTAGCACATTTTTGa.............................................................. read_27119_1_0_0_0_0_0 MATURE 1 6.67 1 12.50 0 0.00 a 20
---------- ---------- ----------
15 8 7
(53.33) (46.67)
*** OTHER ***
__________________________________________________________________________________________________________
CCAGTACCATCTGCTTGGCCGATTTTGGCACTAGCACATTTTTGCTTGTGTCTCTCCGCTGTGAGCAATCATGTGTAGTGCCAATATGGGAAAAGCGGGCTGCTGC REF 6 30119446 - 30119551
TTTGGCACTAGCACATTTTTGCT MATURE 6 30119470 - 30119597 mmu-miR-96 -
__________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..................................................................AATCATGTGTAGTGCCAATATt................... read_159959_0_0_0_0_0_1 OTHER 1 100.00 0 0 1 100.00 t 21
---------- ---------- ----------
1 0 1
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 8 7 15 93.75%
OTHER 0 1 1 6.25%
---------- ---------- ----------
8 8 16
[END]