[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************************
ID : mmu-mir-877
DESCRIPTION : mmu-mir-877 MI0005553 Mus musculus miR-877 stem-loop
CHROMOSOME : 17
SPAN : 36097675 - 36097759
LENGTH : 85
SEQUENCE : GTAGAGGAGATGGCGCAGGGGACACAAGGTAGGCCTTGCGGGTCTGTGGACCCTTGGACATGTGTCCTCTTCTCCCTCCTCCCAG
OVERHANG THRESHOLD : 75%
**********************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-877
ACCID : MI0005553
PARENT : mmu-mir-877
CHROMOSOME : 17
START : 36097675
STOP : 36097759
OFFSET : 1..20
SEQUENCE : GTAGAGGAGATGGCGCAGGG
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-877*
ACCID : MI0005553
PARENT : mmu-mir-877
CHROMOSOME : 17
START : 36097675
STOP : 36097759
OFFSET : 63..84
SEQUENCE : TGTCCTCTTCTCCCTCCTCCCA
STRAND : -
******************************
*** MATURE ***
_____________________________________________________________________________________
GTAGAGGAGATGGCGCAGGGGACACAAGGTAGGCCTTGCGGGTCTGTGGACCCTTGGACATGTGTCCTCTTCTCCCTCCTCCCAG REF 17 36097675 - 36097759
GTAGAGGAGATGGCGCAGGG MATURE 17 36097676 - 36097779 mmu-miR-877 -
TGTCCTCTTCTCCCTCCTCCCA MATURESTAR 17 36097738 - 36097843 mmu-miR-877* -
_____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..AGAGGAGATGGCGCAGGGGACt.............................................................. read_128311_0_0_0_0_0_1 MATURE 1 33.33 0 0 1 33.33 t 21
..AGAGGAGATGGCGCAGGGGc................................................................ read_314722_0_0_0_1_0_0 MATURE 1 33.33 0 0 1 33.33 c 19
..AGAGGAGATGGCGCAGGG.................................................................. read_44912_0_0_0_0_1_0 MATURE 1 33.33 0 0 1 33.33 18
---------- ---------- ----------
3 0 3
(0.00) (100.00)
*** MATURESTAR ***
_____________________________________________________________________________________
GTAGAGGAGATGGCGCAGGGGACACAAGGTAGGCCTTGCGGGTCTGTGGACCCTTGGACATGTGTCCTCTTCTCCCTCCTCCCAG REF 17 36097675 - 36097759
GTAGAGGAGATGGCGCAGGG MATURE 17 36097676 - 36097779 mmu-miR-877 -
TGTCCTCTTCTCCCTCCTCCCA MATURESTAR 17 36097738 - 36097843 mmu-miR-877* -
_____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...............................................................GTCCTCTTCTCCCTCCTCCCAGt read_71689_0_0_2_0_2_0 MATURESTAR 4 40.00 2 66.67 2 28.57 t 22
...............................................................GTCCTCTTCTCCCTCCTCCC... read_394255_0_0_0_1_0_0 MATURESTAR 1 10.00 0 0.00 1 14.29 20
...............................................................GTCCTCTTCTCCCTCCTCCCAGtat read_140245_0_0_0_0_1_0 MATURESTAR 1 10.00 0 0.00 1 14.29 tat 22
...............................................................GTCCTCTTCTCCCTCCTCCCAt. read_280066_0_0_0_0_1_0 MATURESTAR 1 10.00 0 0.00 1 14.29 t 21
...............................................................GTCCTCTTCTCCCTCCTCCCAa. read_73789_0_0_0_1_0_0 MATURESTAR 1 10.00 0 0.00 1 14.29 a 21
.................................................................CCTCTTCTCCCTCCTCCCAGa read_280283_0_0_0_0_0_1 MATURESTAR 1 10.00 0 0.00 1 14.29 a 20
...............................................................GTCCTCTTCTCCCTCCTCCCAtt read_32915_0_0_1_0_0_0 MATURESTAR 1 10.00 1 33.33 0 0.00 tt 21
---------- ---------- ----------
10 3 7
(30.00) (70.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 0 3 3 23.08%
MATURESTAR 3 7 10 76.92%
---------- ---------- ----------
3 10 13
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