[BEGIN]
REFERENCE HAIRPIN
*************************************************************************************************
ID : mmu-mir-874
DESCRIPTION : mmu-mir-874 MI0005479 Mus musculus miR-874 stem-loop
CHROMOSOME : 13
SPAN : 58124486 - 58124561
LENGTH : 76
SEQUENCE : TTAGCCCTGCGGCCCCACGCACCAGGGTAAGAGAGACTCACTTCCTGCCCTGGCCCGAGGGACCGACTGGCTGGGC
OVERHANG THRESHOLD : 75%
*************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-874
ACCID : MI0005479
PARENT : mmu-mir-874
CHROMOSOME : 13
START : 58124486
STOP : 58124561
OFFSET : 45..66
SEQUENCE : CTGCCCTGGCCCGAGGGACCGA
STRAND : -
******************************
*** MATURE ***
____________________________________________________________________________
TTAGCCCTGCGGCCCCACGCACCAGGGTAAGAGAGACTCACTTCCTGCCCTGGCCCGAGGGACCGACTGGCTGGGC REF 13 58124486 - 58124561
CTGCCCTGGCCCGAGGGACCGA MATURE 13 58124531 - 58124627 mmu-miR-874 -
____________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............................................TGCCCTGGCaCGAGGGACCGAC.......... read_60908_0_1_0_0_0_0 MATURE 1 12.50 1 25.00 0 0.00 9A12
.............................................TGCCCTGGCCCGAGGGACCGc........... read_129835_0_0_0_1_0_0 MATURE 1 12.50 0 0.00 1 25.00 c 20
.............................................TGCCCTGGCaCGAGGGACCGA........... read_329034_0_1_0_0_0_0 MATURE 1 12.50 1 25.00 0 0.00 9A11
..............................................GCCCTGGCCCGAGGGACCGt........... read_282062_0_0_0_0_0_1 MATURE 1 12.50 0 0.00 1 25.00 t 19
.............................................TGCCCTGGCCCGAGGGcCCGAt.......... read_289533_0_0_0_0_1_0 MATURE 1 12.50 0 0.00 1 25.00 t 16C4
..............................................GCCCTGGCCCGAGGGACCGA........... read_220915_0_0_0_0_1_0 MATURE 1 12.50 0 0.00 1 25.00 20
.............................................TGCCCTGGCCCGAGGGACCGAC.......... read_262273_0_0_1_0_0_0 MATURE 1 12.50 1 25.00 0 0.00 22
.............................................TGCCCTGGCCCGAGGGACCGA........... read_268294_0_1_0_0_0_0 MATURE 1 12.50 1 25.00 0 0.00 21
---------- ---------- ----------
8 4 4
(50.00) (50.00)
*** OTHER ***
____________________________________________________________________________
TTAGCCCTGCGGCCCCACGCACCAGGGTAAGAGAGACTCACTTCCTGCCCTGGCCCGAGGGACCGACTGGCTGGGC REF 13 58124486 - 58124561
CTGCCCTGGCCCGAGGGACCGA MATURE 13 58124531 - 58124627 mmu-miR-874 -
____________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..........GGCCCCACGCACCAGGGTAAGA............................................. read_124133_0_0_1_0_0_0 OTHER 1 50.00 1 100.00 0 0.00 22
..........GGCCCCACGCACCAGGGTAAG.............................................. read_257032_0_0_0_0_1_0 OTHER 1 50.00 0 0.00 1 100.00 21
---------- ---------- ----------
2 1 1
(50.00) (50.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 4 4 8 80.00%
OTHER 1 1 2 20.00%
---------- ---------- ----------
5 5 10
[END]