[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-805
DESCRIPTION : mmu-mir-805 MI0005204 Mus musculus miR-805 stem-loop
CHROMOSOME : MT
SPAN : 16115 - 16209
LENGTH : 95
SEQUENCE : GTCATATTTTGGGAACTACTAGAATTGATCAGGACATAGGGTTTGATAGTTAATATTATATGTCTTTCAAGTTCTTAGTGTTTTTGGGGTTTGGC
OVERHANG THRESHOLD : 75%
********************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-805
ACCID : MI0005204
PARENT : mmu-mir-805
CHROMOSOME : MT
START : 16115
STOP : 16209
OFFSET : 22..41
SEQUENCE : GAATTGATCAGGACATAGGG
STRAND : -
******************************
*** MATURE ***
_______________________________________________________________________________________________
GTCATATTTTGGGAACTACTAGAATTGATCAGGACATAGGGTTTGATAGTTAATATTATATGTCTTTCAAGTTCTTAGTGTTTTTGGGGTTTGGC REF MT 16115 - 16209
GAATTGATCAGGACATAGGG MATURE MT 16137 - 16250 mmu-miR-805 -
_______________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
......................AATTGATCAGGACATAGGG....................................................... read_167766_19_18_4_3_5_2 MATURE 51 18.15 41 21.58 10 10.99 19
......................AATTGATCAGGACATAGGa....................................................... read_63077_10_9_10_2_8_6 MATURE 45 16.01 29 15.26 16 17.58 a 18
......................AATTGATCAGGACATAGGaa...................................................... read_94929_3_11_5_1_2_1 MATURE 23 8.19 19 10.00 4 4.40 aa 18
......................AATTGATCAGGACATAGG........................................................ read_131026_4_2_5_1_5_2 MATURE 19 6.76 11 5.79 8 8.79 18
......................AATTGATCAGGACATAGGaccaa................................................... read_129049_4_4_2_1_0_1 MATURE 12 4.27 10 5.26 2 2.20 accaa 18
......................AATTGATCAGGACATAG......................................................... read_40112_0_2_1_4_3_2 MATURE 12 4.27 3 1.58 9 9.89 17
......................AATTGATCAGGACATAGGaaa..................................................... read_407402_2_2_0_1_1_3 MATURE 9 3.20 4 2.11 5 5.49 aaa 18
......................AATTGATCAGGACATAGGaca..................................................... read_321188_2_1_3_1_0_2 MATURE 9 3.20 6 3.16 3 3.30 aca 18
......................AATTGATCAGGACATAGGacca.................................................... read_289253_1_2_3_1_0_1 MATURE 8 2.85 6 3.16 2 2.20 acca 18
......................AATTGATCAGGACATAGGaaaa.................................................... read_27433_0_4_1_1_2_0 MATURE 8 2.85 5 2.63 3 3.30 aaaa 18
......................AATTGATCAGGACATAGGac...................................................... read_30212_3_1_0_0_0_2 MATURE 6 2.14 4 2.11 2 2.20 ac 18
......................AATTGATCAGGACATAGGGT...................................................... read_3622_1_1_3_0_0_1 MATURE 6 2.14 5 2.63 1 1.10 20
......................AATTGATCAGGACATAGGGTa..................................................... read_379567_0_0_2_0_0_3 MATURE 5 1.78 2 1.05 3 3.30 a 20
......................AATTGATCAGGACATAGGGc...................................................... read_9872_1_2_2_0_0_0 MATURE 5 1.78 5 2.63 0 0.00 c 19
......................AATTGATCAGGACATAGGacaa.................................................... read_278775_1_1_1_1_0_0 MATURE 4 1.42 3 1.58 1 1.10 acaa 18
......................AATTGATCAGGACATAGGGTTTGA.................................................. read_257292_0_1_0_0_0_2 MATURE 3 1.07 1 0.53 2 2.20 24
......................AATTGATCAGGACATAGGaaaaa................................................... read_339392_0_1_1_0_0_1 MATURE 3 1.07 2 1.05 1 1.10 aaaaa 18
.............................CAGGACATAGGGTTTGATA................................................ read_158344_1_0_1_0_0_1 MATURE 3 1.07 2 1.05 1 1.10 19
......................AATTGATCAGGACATAGGGTTTGAa................................................. read_16890_0_0_0_1_0_1 MATURE 2 0.71 0 0.00 2 2.20 a 24
......................AATTGATCAGGACATAGGGcaa.................................................... read_221848_1_1_0_0_0_0 MATURE 2 0.71 2 1.05 0 0.00 caa 19
......................AATTGATCAGGACATAGGGTTTGAT................................................. read_213286_0_1_0_0_0_1 MATURE 2 0.71 1 0.53 1 1.10 25
......................AATTGATCAGGACATAGGGTTTG................................................... read_242141_1_0_0_0_0_1 MATURE 2 0.71 1 0.53 1 1.10 23
......................AATTGATCAGGACATAGGGTTa.................................................... read_52595_0_1_1_0_0_0 MATURE 2 0.71 2 1.05 0 0.00 a 21
......................AATTGATCAGGACATAGGacta.................................................... read_169651_0_1_1_0_0_0 MATURE 2 0.71 2 1.05 0 0.00 acta 18
......................AATTGATCAGGACATAGGttaaaa.................................................. read_278503_0_2_0_0_0_0 MATURE 2 0.71 2 1.05 0 0.00 ttaaaa 18
.............................CAGGACATAGGGTTTGATAa............................................... read_36988_0_0_0_0_0_2 MATURE 2 0.71 0 0.00 2 2.20 a 19
......................AATTGATCAGGACATAGGtaa..................................................... read_405343_0_1_1_0_0_0 MATURE 2 0.71 2 1.05 0 0.00 taa 18
......................AATTGATCAGGACATAGGaccaaa.................................................. read_116463_1_0_1_0_0_0 MATURE 2 0.71 2 1.05 0 0.00 accaaa 18
......................AATTGATCAGGACATAGGGTaa.................................................... read_251918_0_1_0_0_0_0 MATURE 1 0.36 1 0.53 0 0.00 aa 20
......................AATTGATCAGGACATAGGaaca.................................................... read_73223_0_0_1_0_0_0 MATURE 1 0.36 1 0.53 0 0.00 aaca 18
......................AATTGATCAGGACATAGGGTTTa................................................... read_39651_0_0_0_0_0_1 MATURE 1 0.36 0 0.00 1 1.10 a 22
......................AATTGATCAGGACATAGGGTaca................................................... read_304708_0_0_0_1_0_0 MATURE 1 0.36 0 0.00 1 1.10 aca 20
......................AATTGATCAGGACATAGGacc..................................................... read_28356_0_0_0_1_0_0 MATURE 1 0.36 0 0.00 1 1.10 acc 18
.............................CAGGACATAGGGTTTGATtc............................................... read_213454_0_1_0_0_0_0 MATURE 1 0.36 1 0.53 0 0.00 tc 18
.....................GAATTGATCAGGACATAGGa....................................................... read_333487_0_1_0_0_0_0 MATURE 1 0.36 1 0.53 0 0.00 a 19
......................AATTGATCAGGAtATAGGGTTTGA.................................................. read_383087_0_1_0_0_0_0 MATURE 1 0.36 1 0.53 0 0.00 12T11
......................AATTGATCAGGACATAGGGctat................................................... read_188439_0_0_0_0_0_1 MATURE 1 0.36 0 0.00 1 1.10 ctat 19
.........................TGATCAGGACATAGGGTT..................................................... read_921_0_0_0_0_1_0 MATURE 1 0.36 0 0.00 1 1.10 18
.........................TGATCAGGACATAGGGTTTGA.................................................. read_26879_0_0_0_0_0_1 MATURE 1 0.36 0 0.00 1 1.10 21
......................AATTGATCAGGACATAGGacaaa................................................... read_326359_0_1_0_0_0_0 MATURE 1 0.36 1 0.53 0 0.00 acaaa 18
...............................GGACATAGGGTTTGATAGTT............................................. read_331243_0_0_0_0_0_1 MATURE 1 0.36 0 0.00 1 1.10 20
.............................CAGGACATAGGGTTTGATAaaaaa........................................... read_347906_0_1_0_0_0_0 MATURE 1 0.36 1 0.53 0 0.00 aaaaa 19
......................AATTGATCAGGACATAGGtTTT.................................................... read_37461_0_0_1_0_0_0 MATURE 1 0.36 1 0.53 0 0.00 18T3
......................AATTGATCAGGACATAGGGcaaa................................................... read_270562_0_0_1_0_0_0 MATURE 1 0.36 1 0.53 0 0.00 caaa 19
......................cATTGATCAGGACATAGGGTaTG................................................... read_148464_0_0_0_0_0_1 MATURE 1 0.36 0 0.00 1 1.10 19A2
......................AATTGATCAGGACATAGGGcaaaa.................................................. read_59148_0_0_1_0_0_0 MATURE 1 0.36 1 0.53 0 0.00 caaaa 19
......................AATTGATCAGGACATAGGaacaca.................................................. read_225622_1_0_0_0_0_0 MATURE 1 0.36 1 0.53 0 0.00 aacaca 18
......................AATTGATCAGGACATAGGGcca.................................................... read_32272_0_0_0_0_0_1 MATURE 1 0.36 0 0.00 1 1.10 cca 19
......................AATTGATCAGGACATAGGaacaaa.................................................. read_299977_0_0_1_0_0_0 MATURE 1 0.36 1 0.53 0 0.00 aacaaa 18
......................AATTGATCAGGACATAGGt....................................................... read_406174_0_0_1_0_0_0 MATURE 1 0.36 1 0.53 0 0.00 t 18
......................AATTGATCAGGACATAGGGTTT.................................................... read_127_1_0_0_0_0_0 MATURE 1 0.36 1 0.53 0 0.00 22
......................AATTGATCAGGACATAGGGccacca................................................. read_19032_0_1_0_0_0_0 MATURE 1 0.36 1 0.53 0 0.00 ccacca 19
......................AATTGATCAGGACATAGGcacca................................................... read_307335_0_1_0_0_0_0 MATURE 1 0.36 1 0.53 0 0.00 cacca 18
......................AATTGATCAGGACATAGGGTT..................................................... read_105829_0_0_0_0_1_0 MATURE 1 0.36 0 0.00 1 1.10 21
......................AATTGATCAGGACATAGGGTTaca.................................................. read_350776_0_1_0_0_0_0 MATURE 1 0.36 1 0.53 0 0.00 aca 21
......................AATTGATCAGGACATAGGaccac................................................... read_40982_1_0_0_0_0_0 MATURE 1 0.36 1 0.53 0 0.00 accac 18
......................AATTGATCAGGACATAGGGTTaaaa................................................. read_65582_0_0_0_0_0_1 MATURE 1 0.36 0 0.00 1 1.10 aaaa 21
.................................ACATAGGGTTTGATAGTT............................................. read_106917_0_0_0_0_1_0 MATURE 1 0.36 0 0.00 1 1.10 18
---------- ---------- ----------
281 190 91
(67.62) (32.38)
*** OTHER ***
_______________________________________________________________________________________________
GTCATATTTTGGGAACTACTAGAATTGATCAGGACATAGGGTTTGATAGTTAATATTATATGTCTTTCAAGTTCTTAGTGTTTTTGGGGTTTGGC REF MT 16115 - 16209
GAATTGATCAGGACATAGGG MATURE MT 16137 - 16250 mmu-miR-805 -
_______________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............................................................GTCTTTCAAGTTCTTAGTaa............... read_170005_0_0_1_0_0_0 OTHER 1 50.00 1 100.00 0 0.00 aa 18
.....................................AGGGTTTGATAGTTAATAa........................................ read_230040_0_0_0_0_1_0 OTHER 1 50.00 0 0.00 1 100.00 a 18
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2 1 1
(50.00) (50.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 190 91 281 99.29%
OTHER 1 1 2 0.71%
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191 92 283
[END]