[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-7a-2
DESCRIPTION : mmu-mir-7a-2 MI0000729 Mus musculus miR-7a-2 stem-loop
CHROMOSOME : 7
SPAN : 86033163 - 86033259
LENGTH : 97
SEQUENCE : GGTCGGGCCAGCCCCGTTTGGAAGACTAGTGATTTTGTTGTTGTGTCTCTGTATCCAACAACAAGTCCCAGTCTGCCACATGGTGCTGGTCATTTCA
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-7a
ACCID : MI0000729
PARENT : mmu-mir-7a-2
CHROMOSOME : 7
START : 86033163
STOP : 86033259
OFFSET : 19..41
SEQUENCE : TGGAAGACTAGTGATTTTGTTGT
STRAND : +
******************************
*** MATURE ***
_________________________________________________________________________________________________
GGTCGGGCCAGCCCCGTTTGGAAGACTAGTGATTTTGTTGTTGTGTCTCTGTATCCAACAACAAGTCCCAGTCTGCCACATGGTGCTGGTCATTTCA REF 7 86033163 - 86033259
TGGAAGACTAGTGATTTTGTTGT MATURE 7 86033182 - 86033300 mmu-miR-7a +
_________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...................GGAAGACTAGTGATTTTGTTGTT........................................................ read_317719_67_72_49_30_48_54 MATURE 320 57.14 188 60.45 132 53.01 23
...................GGAAGACTAGTGATTTTGTTGT......................................................... read_52368_21_16_15_8_6_12 MATURE 78 13.93 52 16.72 26 10.44 22
...................GGAAGACTAGTGATTTTGTTtTT........................................................ read_59282_0_4_4_4_5_5 MATURE 22 3.93 8 2.57 14 5.62 20T2
...................GGAAGACTAGTGATTTTGTTG.......................................................... read_327553_7_2_4_2_3_0 MATURE 18 3.21 13 4.18 5 2.01 21
...................GGAAGACTAGTGATTTTGTTGTTt....................................................... read_193008_0_2_5_1_3_3 MATURE 14 2.50 7 2.25 7 2.81 t 23
.......................GACTAGTGATTTTGTTGTT........................................................ read_47691_1_0_0_3_5_5 MATURE 14 2.50 1 0.32 13 5.22 19
...................GGAAGACTAGTGATTTTGTTtt......................................................... read_65964_1_4_1_5_2_1 MATURE 14 2.50 6 1.93 8 3.21 tt 20
...................GGAAGACTAGTGATTTTGTTGTTa....................................................... read_57303_1_4_1_1_1_2 MATURE 10 1.79 6 1.93 4 1.61 a 23
........................ACTAGTGATTTTGTTGTT........................................................ read_71677_0_0_0_0_6_1 MATURE 7 1.25 0 0.00 7 2.81 18
...................GGAAGACTAGTGATTTT.............................................................. read_380385_0_0_0_1_2_3 MATURE 6 1.07 0 0.00 6 2.41 17
...................GGAAGACTAGTGATTTTGTT........................................................... read_375561_1_1_1_1_0_1 MATURE 5 0.89 3 0.96 2 0.80 20
...................GGAAGACTAGTGATTTTG............................................................. read_117_2_1_0_0_1_0 MATURE 4 0.71 3 0.96 1 0.40 18
...................GGAAGACTAGTGATcTTGTTGTT........................................................ read_69408_3_0_0_0_0_0 MATURE 3 0.54 3 0.96 0 0.00 14C8
...................GGAAGACTAGTGATTTTtTTGTT........................................................ read_101584_0_0_0_0_2_1 MATURE 3 0.54 0 0.00 3 1.20 17T5
...................GGAAGACTAGTGATTTTGT............................................................ read_129733_0_1_0_0_2_0 MATURE 3 0.54 1 0.32 2 0.80 19
...................GGAAGACTAGTGATgTTGTTGTT........................................................ read_79783_3_0_0_0_0_0 MATURE 3 0.54 3 0.96 0 0.00 14G8
...................GGAAGACTAGTGATcTTGTTGT......................................................... read_369720_2_0_0_0_0_0 MATURE 2 0.36 2 0.64 0 0.00 14C7
....................GAAGACTAGTGATTTTGTTGTT........................................................ read_344967_0_1_1_0_0_0 MATURE 2 0.36 2 0.64 0 0.00 22
.......................GACTAGTGATTTTGTTGT......................................................... read_139406_0_0_0_1_0_1 MATURE 2 0.36 0 0.00 2 0.80 18
...................GGAAGACTAGcGATTTTGTTGTT........................................................ read_41948_0_0_0_1_0_1 MATURE 2 0.36 0 0.00 2 0.80 10C12
........................ACTAGTGATTTTGTTGT......................................................... read_332696_0_0_0_0_0_2 MATURE 2 0.36 0 0.00 2 0.80 17
...................GGAAGACTAGTGATTTcGTTGTT........................................................ read_142136_2_0_0_0_0_0 MATURE 2 0.36 2 0.64 0 0.00 16C6
.........................CTAGTGATTTTGTTGTT........................................................ read_14785_0_0_0_2_0_0 MATURE 2 0.36 0 0.00 2 0.80 17
...................GGAAGACTAGTGATTTTaTTGTT........................................................ read_171334_0_0_1_1_0_0 MATURE 2 0.36 1 0.32 1 0.40 17A5
...................GGAAGACTAtTGATTTTGTTGTT........................................................ read_357866_0_0_1_0_0_0 MATURE 1 0.18 1 0.32 0 0.00 9T13
...................GGAAGACTAGTGcTTTTGTTGTT........................................................ read_190402_0_0_1_0_0_0 MATURE 1 0.18 1 0.32 0 0.00 12C10
...................GGAAGACTAGTGATTTTGTTGa......................................................... read_223201_0_0_1_0_0_0 MATURE 1 0.18 1 0.32 0 0.00 a 21
......................AGACTAGTGATTTTGTTGT......................................................... read_151610_0_0_0_1_0_0 MATURE 1 0.18 0 0.00 1 0.40 19
...................GGAAGACTAGTGATTTTGTTGaa........................................................ read_259602_0_1_0_0_0_0 MATURE 1 0.18 1 0.32 0 0.00 aa 21
...................GGAAGACTAGTGtTTTTGTTGT......................................................... read_219870_0_0_1_0_0_0 MATURE 1 0.18 1 0.32 0 0.00 12T9
...................GGAAGACTAGTGATTTTGTTt.......................................................... read_322991_0_0_0_0_1_0 MATURE 1 0.18 0 0.00 1 0.40 t 20
...................GGAAGACTAGTGATTTTGTTtTTa....................................................... read_201137_0_1_0_0_0_0 MATURE 1 0.18 1 0.32 0 0.00 a 20T2
...................GGAAGACTAGTGATTTTGTTGTTaa...................................................... read_149466_0_0_0_1_0_0 MATURE 1 0.18 0 0.00 1 0.40 aa 23
...................GGAAGACTAGTGATaTTGTTGTT........................................................ read_318933_1_0_0_0_0_0 MATURE 1 0.18 1 0.32 0 0.00 14A8
...................GGAAGACTAGTGATTTTGTTGTaaa...................................................... read_75314_0_0_0_1_0_0 MATURE 1 0.18 0 0.00 1 0.40 aaa 22
...................GGAAGACTAGTGATTTTGTTGct........................................................ read_320559_0_0_0_0_1_0 MATURE 1 0.18 0 0.00 1 0.40 ct 21
...................aGAAGACTAGTGATTTTGTTGTT........................................................ read_122950_1_0_0_0_0_0 MATURE 1 0.18 1 0.32 0 0.00 22
...................GGAAGACTAGTGATTTTGTTGTTcTGT.................................................... read_202012_0_0_0_0_0_1 MATURE 1 0.18 0 0.00 1 0.40 23C3
...................GGAAGACTAGTGATTTTGTg........................................................... read_104454_0_0_0_1_0_0 MATURE 1 0.18 0 0.00 1 0.40 g 19
...................GGAAGACTAGTGATTTTGcTGT......................................................... read_207352_0_0_0_0_1_0 MATURE 1 0.18 0 0.00 1 0.40 18C3
...................GGAAGACTAGTGtTTTTGTTGTT........................................................ read_349579_0_0_1_0_0_0 MATURE 1 0.18 1 0.32 0 0.00 12T10
...................GGAAGACTAGTGAcTTTGTTGT......................................................... read_104949_0_0_0_0_1_0 MATURE 1 0.18 0 0.00 1 0.40 13C8
...................GGAAGACTAGTGgTTTTGTTGTT........................................................ read_403905_0_1_0_0_0_0 MATURE 1 0.18 1 0.32 0 0.00 12G10
...................GGAAaACTAGTGATTTTGTTGTT........................................................ read_106681_0_0_0_0_1_0 MATURE 1 0.18 0 0.00 1 0.40 4A18
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560 311 249
(55.54) (44.46)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
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MATURE 311 249 560 100.00%
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311 249 560
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