[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-709
DESCRIPTION : mmu-mir-709 MI0004693 Mus musculus miR-709 stem-loop
CHROMOSOME : 8
SPAN : 86609998 - 86610085
LENGTH : 88
SEQUENCE : TGTCCCGTTTCTCTGCTTCTACTCAGAAGTGCTCTGAGCATAGAACTGTCCTGTTTGAGCAGCACTGGGGAGGCAGAGGCAGGAGGAT
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-709
ACCID : MI0004693
PARENT : mmu-mir-709
CHROMOSOME : 8
START : 86609998
STOP : 86610085
OFFSET : 69..87
SEQUENCE : GGAGGCAGAGGCAGGAGGA
STRAND : +
******************************
*** MATURE ***
________________________________________________________________________________________
TGTCCCGTTTCTCTGCTTCTACTCAGAAGTGCTCTGAGCATAGAACTGTCCTGTTTGAGCAGCACTGGGGAGGCAGAGGCAGGAGGAT REF 8 86609998 - 86610085
GGAGGCAGAGGCAGGAGGA MATURE 8 86610067 - 86610172 mmu-miR-709 +
________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
....................................................................GGAGGCAGAGGCAGGAGG... read_191139_1_1_0_0_3_3 MATURE 8 19.51 2 100.00 6 15.38 18
....................................................................GGAGGCAGAGGCAGGAGGA.. read_221622_0_0_0_3_1_3 MATURE 7 17.07 0 0.00 7 17.95 19
.......................................................................GGCAGAGGCAGGAGGAT. read_165359_0_0_0_4_1_2 MATURE 7 17.07 0 0.00 7 17.95 17
....................................................................GGAGGCAGAGGCAGGAGGAT. read_376517_0_0_0_3_1_0 MATURE 4 9.76 0 0.00 4 10.26 20
......................................................................AGGCAGAGGCAGGAGGA.. read_36159_0_0_0_2_1_1 MATURE 4 9.76 0 0.00 4 10.26 17
......................................................................AGGCAGAGGCAGGAGGAT. read_343290_0_0_0_1_0_3 MATURE 4 9.76 0 0.00 4 10.26 18
....................................................................GGAGGCAGAGGCAGGAG.... read_297165_0_0_0_1_1_1 MATURE 3 7.32 0 0.00 3 7.69 17
.....................................................................GAGGCAGAGGCAGGAGGAT. read_191195_0_0_0_2_0_0 MATURE 2 4.88 0 0.00 2 5.13 19
.....................................................................GAGGCAGAGGCAGGAGG... read_28148_0_0_0_1_0_0 MATURE 1 2.44 0 0.00 1 2.56 17
.....................................................................GAGGCAGAGGCAGGAGGA.. read_17491_0_0_0_0_1_0 MATURE 1 2.44 0 0.00 1 2.56 18
---------- ---------- ----------
41 2 39
(4.88) (95.12)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 2 39 41 100.00%
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2 39 41
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