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REFERENCE HAIRPIN
**********************************************************************************************************************************
ID                 : mmu-mir-708
DESCRIPTION        : mmu-mir-708 MI0004692 Mus musculus miR-708 stem-loop
CHROMOSOME         : 7
SPAN               : 103397934 - 103398042
LENGTH             : 109
SEQUENCE           : CTGTGTTTGAAATGGGGACTGCCCTCAAGGAGCTTACAATCTAGCTGGGGGTAGATGACTTGCACTTGAACACAACTAGACTGTGAGCTTCTAGAGGGCAGGGGCCTTA
OVERHANG THRESHOLD : 75%
**********************************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-708
ACCID      : MI0004692
PARENT     : mmu-mir-708
CHROMOSOME : 7
START      : 103397934
STOP       : 103398042
OFFSET     : 27..49
SEQUENCE   : AAGGAGCTTACAATCTAGCTGGG
STRAND     : +
******************************


TARGET
******************************
CATEGORY   : MATURESTAR
ID         : mmu-miR-708*
ACCID      : MI0004692
PARENT     : mmu-mir-708
CHROMOSOME : 7
START      : 103397934
STOP       : 103398042
OFFSET     : 73..94
SEQUENCE   : CAACTAGACTGTGAGCTTCTAG
STRAND     : +
******************************



*** MATURE ***
_____________________________________________________________________________________________________________
CTGTGTTTGAAATGGGGACTGCCCTCAAGGAGCTTACAATCTAGCTGGGGGTAGATGACTTGCACTTGAACACAACTAGACTGTGAGCTTCTAGAGGGCAGGGGCCTTA REF                  7                    103397934 - 103398042 
                          AAGGAGCTTACAATCTAGCTGGG                                                             MATURE               7                    103397961 - 103398091 mmu-miR-708          +                    
                                                                        CAACTAGACTGTGAGCTTCTAG                MATURESTAR           7                    103398007 - 103398136 mmu-miR-708*         +                    
_____________________________________________________________________________________________________________

                                                                                                         -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
...........................AGGAGCTTACAATCTAGCTGGG.............................................................   read_387078_1_0_2_0_0_0       MATURE            3        75.00            3       100.00            0         0.00                        22   
...........................AGGAGCTTACAATCTAGCTGG..............................................................   read_169782_0_0_0_1_0_0       MATURE            1        25.00            0         0.00            1       100.00                        21   
                                                                                                                                                        ----------                ----------                ----------   
                                                                                                                                                                 4                         3                         1                                          
                                                                                                                                                                                     (75.00)                   (25.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               3               1               4         100.00%
                     ----------      ----------      ----------                
                              3               1               4                



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