[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************************************************
ID : mmu-mir-708
DESCRIPTION : mmu-mir-708 MI0004692 Mus musculus miR-708 stem-loop
CHROMOSOME : 7
SPAN : 103397934 - 103398042
LENGTH : 109
SEQUENCE : CTGTGTTTGAAATGGGGACTGCCCTCAAGGAGCTTACAATCTAGCTGGGGGTAGATGACTTGCACTTGAACACAACTAGACTGTGAGCTTCTAGAGGGCAGGGGCCTTA
OVERHANG THRESHOLD : 75%
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TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-708
ACCID : MI0004692
PARENT : mmu-mir-708
CHROMOSOME : 7
START : 103397934
STOP : 103398042
OFFSET : 27..49
SEQUENCE : AAGGAGCTTACAATCTAGCTGGG
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-708*
ACCID : MI0004692
PARENT : mmu-mir-708
CHROMOSOME : 7
START : 103397934
STOP : 103398042
OFFSET : 73..94
SEQUENCE : CAACTAGACTGTGAGCTTCTAG
STRAND : +
******************************
*** MATURE ***
_____________________________________________________________________________________________________________
CTGTGTTTGAAATGGGGACTGCCCTCAAGGAGCTTACAATCTAGCTGGGGGTAGATGACTTGCACTTGAACACAACTAGACTGTGAGCTTCTAGAGGGCAGGGGCCTTA REF 7 103397934 - 103398042
AAGGAGCTTACAATCTAGCTGGG MATURE 7 103397961 - 103398091 mmu-miR-708 +
CAACTAGACTGTGAGCTTCTAG MATURESTAR 7 103398007 - 103398136 mmu-miR-708* +
_____________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........................AGGAGCTTACAATCTAGCTGGG............................................................. read_387078_1_0_2_0_0_0 MATURE 3 75.00 3 100.00 0 0.00 22
...........................AGGAGCTTACAATCTAGCTGG.............................................................. read_169782_0_0_0_1_0_0 MATURE 1 25.00 0 0.00 1 100.00 21
---------- ---------- ----------
4 3 1
(75.00) (25.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 3 1 4 100.00%
---------- ---------- ----------
3 1 4
[END]