[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-701
DESCRIPTION : mmu-mir-701 MI0004685 Mus musculus miR-701 stem-loop
CHROMOSOME : 5
SPAN : 111433163 - 111433271
LENGTH : 109
SEQUENCE : GTGGAGCATCTACCTTGAGCAAGTAATTAGCCGCTGAAATAGATGGATTGTATAGATGAGGTTCTATCTATTAAAGAGGCTAGCCACTTATCAAGTGCTAACAGCCCAC
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-701
ACCID : MI0004685
PARENT : mmu-mir-701
CHROMOSOME : 5
START : 111433163
STOP : 111433271
OFFSET : 27..47
SEQUENCE : TTAGCCGCTGAAATAGATGGA
STRAND : +
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*** MATURE ***
_____________________________________________________________________________________________________________
GTGGAGCATCTACCTTGAGCAAGTAATTAGCCGCTGAAATAGATGGATTGTATAGATGAGGTTCTATCTATTAAAGAGGCTAGCCACTTATCAAGTGCTAACAGCCCAC REF 5 111433163 - 111433271
TTAGCCGCTGAAATAGATGGA MATURE 5 111433190 - 111433318 mmu-miR-701 +
_____________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........................TAGCCGCTGAAATAGATGGA............................................................... read_198622_3_2_2_0_0_0 MATURE 7 63.64 7 70.00 0 0.00 20
...........................TAGCCGCTGAAATAGATGGAa.............................................................. read_22299_0_1_0_0_0_1 MATURE 2 18.18 1 10.00 1 100.00 a 20
...........................TAGCCGCTGAAATAtATGGA............................................................... read_250983_1_0_0_0_0_0 MATURE 1 9.09 1 10.00 0 0.00 14T5
...........................TAGCCGCTGAAATAGATGGt............................................................... read_275803_0_0_1_0_0_0 MATURE 1 9.09 1 10.00 0 0.00 t 19
---------- ---------- ----------
11 10 1
(90.91) (9.09)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 10 1 11 100.00%
---------- ---------- ----------
10 1 11
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