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REFERENCE HAIRPIN
**********************************************************************************************************************************
ID                 : mmu-mir-690
DESCRIPTION        : mmu-mir-690 MI0004658 Mus musculus miR-690 stem-loop
CHROMOSOME         : 16
SPAN               : 28600021 - 28600129
LENGTH             : 109
SEQUENCE           : TGTGTTTTTGTGGAGCTAATTGGCTGTATTAAAGTGCTAGTAAGAAACATTCTCCTCCAGCTGGAGAGATGGCTCAGCTGTTAAAGGCTAGGCTCACAACCAAAATATA
OVERHANG THRESHOLD : 75%
**********************************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-690
ACCID      : MI0004658
PARENT     : mmu-mir-690
CHROMOSOME : 16
START      : 28600021
STOP       : 28600129
OFFSET     : 83..104
SEQUENCE   : AAAGGCTAGGCTCACAACCAAA
STRAND     : -
******************************



*** MATURE ***
_____________________________________________________________________________________________________________
TGTGTTTTTGTGGAGCTAATTGGCTGTATTAAAGTGCTAGTAAGAAACATTCTCCTCCAGCTGGAGAGATGGCTCAGCTGTTAAAGGCTAGGCTCACAACCAAAATATA REF                  16                   28600021 - 28600129  
                                                                                  AAAGGCTAGGCTCACAACCAAA      MATURE               16                   28600104 - 28600233  mmu-miR-690          -                    
_____________________________________________________________________________________________________________

                                                                                                         -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
...................................................................................AAGGCTAGGCTCACAACC.........   read_391335_0_0_0_1_0_0       MATURE            1        25.00            0            0            1        25.00                        18   
...............................................................................GTTAAAGGCTAGGCTCACAACCAA.......    read_98553_0_0_0_0_0_1       MATURE            1        25.00            0            0            1        25.00                        24   
...................................................................................AAGGCTAGGCTCACAACCAAAA.....   read_167877_0_0_0_0_1_0       MATURE            1        25.00            0            0            1        25.00                        22   
...................................................................................AAGGCTAGGCTCACAACCAA.......    read_31912_0_0_0_0_0_1       MATURE            1        25.00            0            0            1        25.00                        20   
                                                                                                                                                        ----------                ----------                ----------   
                                                                                                                                                                 4                         0                         4                                          
                                                                                                                                                                                      (0.00)                  (100.00)                                       




*** OTHER ***
_____________________________________________________________________________________________________________
TGTGTTTTTGTGGAGCTAATTGGCTGTATTAAAGTGCTAGTAAGAAACATTCTCCTCCAGCTGGAGAGATGGCTCAGCTGTTAAAGGCTAGGCTCACAACCAAAATATA REF                  16                   28600021 - 28600129  
                                                                                  AAAGGCTAGGCTCACAACCAAA      MATURE               16                   28600104 - 28600233  mmu-miR-690          -                    
_____________________________________________________________________________________________________________

                                                                                                         -SEQ-                       -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
............................................................CTGGAGAGATGGCTCAG.................................       read_28451_1_0_0_0_2_2        OTHER            5        38.46            1        16.67            4        57.14                        17   
...........................................................GCTGGAGAGATGGCTCAG.................................      read_272230_1_2_0_0_1_0        OTHER            4        30.77            3        50.00            1        14.29                        18   
...........................................................GCTGGAGAGATGGCTCA..................................      read_398933_0_1_0_1_0_0        OTHER            2        15.38            1        16.67            1        14.29                        17   
..........................................................AGCTGGAGAGATGGCTC...................................       read_65759_0_0_0_0_0_1        OTHER            1         7.69            0         0.00            1        14.29                        17   
.............................................................TGGAGAGATGGCTCAGC................................      read_175627_1_0_0_0_0_0        OTHER            1         7.69            1        16.67            0         0.00                        17   
                                                                                                                                                           ----------                ----------                ----------   
                                                                                                                                                                   13                         6                         7                                          
                                                                                                                                                                                        (46.15)                   (53.85)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               0               4               4          23.53%
          OTHER               6               7              13          76.47%
                     ----------      ----------      ----------                
                              6              11              17                



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