[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************************************************
ID : mmu-mir-690
DESCRIPTION : mmu-mir-690 MI0004658 Mus musculus miR-690 stem-loop
CHROMOSOME : 16
SPAN : 28600021 - 28600129
LENGTH : 109
SEQUENCE : TGTGTTTTTGTGGAGCTAATTGGCTGTATTAAAGTGCTAGTAAGAAACATTCTCCTCCAGCTGGAGAGATGGCTCAGCTGTTAAAGGCTAGGCTCACAACCAAAATATA
OVERHANG THRESHOLD : 75%
**********************************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-690
ACCID : MI0004658
PARENT : mmu-mir-690
CHROMOSOME : 16
START : 28600021
STOP : 28600129
OFFSET : 83..104
SEQUENCE : AAAGGCTAGGCTCACAACCAAA
STRAND : -
******************************
*** MATURE ***
_____________________________________________________________________________________________________________
TGTGTTTTTGTGGAGCTAATTGGCTGTATTAAAGTGCTAGTAAGAAACATTCTCCTCCAGCTGGAGAGATGGCTCAGCTGTTAAAGGCTAGGCTCACAACCAAAATATA REF 16 28600021 - 28600129
AAAGGCTAGGCTCACAACCAAA MATURE 16 28600104 - 28600233 mmu-miR-690 -
_____________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...................................................................................AAGGCTAGGCTCACAACC......... read_391335_0_0_0_1_0_0 MATURE 1 25.00 0 0 1 25.00 18
...............................................................................GTTAAAGGCTAGGCTCACAACCAA....... read_98553_0_0_0_0_0_1 MATURE 1 25.00 0 0 1 25.00 24
...................................................................................AAGGCTAGGCTCACAACCAAAA..... read_167877_0_0_0_0_1_0 MATURE 1 25.00 0 0 1 25.00 22
...................................................................................AAGGCTAGGCTCACAACCAA....... read_31912_0_0_0_0_0_1 MATURE 1 25.00 0 0 1 25.00 20
---------- ---------- ----------
4 0 4
(0.00) (100.00)
*** OTHER ***
_____________________________________________________________________________________________________________
TGTGTTTTTGTGGAGCTAATTGGCTGTATTAAAGTGCTAGTAAGAAACATTCTCCTCCAGCTGGAGAGATGGCTCAGCTGTTAAAGGCTAGGCTCACAACCAAAATATA REF 16 28600021 - 28600129
AAAGGCTAGGCTCACAACCAAA MATURE 16 28600104 - 28600233 mmu-miR-690 -
_____________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
............................................................CTGGAGAGATGGCTCAG................................. read_28451_1_0_0_0_2_2 OTHER 5 38.46 1 16.67 4 57.14 17
...........................................................GCTGGAGAGATGGCTCAG................................. read_272230_1_2_0_0_1_0 OTHER 4 30.77 3 50.00 1 14.29 18
...........................................................GCTGGAGAGATGGCTCA.................................. read_398933_0_1_0_1_0_0 OTHER 2 15.38 1 16.67 1 14.29 17
..........................................................AGCTGGAGAGATGGCTC................................... read_65759_0_0_0_0_0_1 OTHER 1 7.69 0 0.00 1 14.29 17
.............................................................TGGAGAGATGGCTCAGC................................ read_175627_1_0_0_0_0_0 OTHER 1 7.69 1 16.67 0 0.00 17
---------- ---------- ----------
13 6 7
(46.15) (53.85)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 0 4 4 23.53%
OTHER 6 7 13 76.47%
---------- ---------- ----------
6 11 17
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