[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************************************************
ID : mmu-mir-689-2
DESCRIPTION : mmu-mir-689-2 MI0004655 Mus musculus miR-689-2 stem-loop
CHROMOSOME : 16
SPAN : 11144133 - 11144241
LENGTH : 109
SEQUENCE : CCCGGATAGCCGGGTCCCCGTCCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCCCCGCGGCGGCGCGGGGTCTCCCCCCGCCGGGCGTCGGGACCGGGGTCCGGTGCGG
OVERHANG THRESHOLD : 75%
**********************************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-689
ACCID : MI0004655
PARENT : mmu-mir-689-2
CHROMOSOME : 16
START : 11144133
STOP : 11144241
OFFSET : 23..43
SEQUENCE : CGTCCCCGCTCGGCGGGGTCC
STRAND : +
******************************
*** MATURE ***
_____________________________________________________________________________________________________________
CCCGGATAGCCGGGTCCCCGTCCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCCCCGCGGCGGCGCGGGGTCTCCCCCCGCCGGGCGTCGGGACCGGGGTCCGGTGCGG REF 16 11144133 - 11144241
CGTCCCCGCTCGGCGGGGTCC MATURE 16 11144156 - 11144284 mmu-miR-689 +
_____________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...............................TCGGCGGGGTCCCCGCGTCG........................................................... read_204853_0_0_0_2_2_1 MATURE 5 9.26 0 0.00 5 10.20 20
...................................CGGGGTCCCCGCGTCGTC......................................................... read_106515_0_0_0_2_1_1 MATURE 4 7.41 0 0.00 4 8.16 18
...................................CGGGGTCCCCGCGTCGTCC........................................................ read_59579_0_0_0_1_3_0 MATURE 4 7.41 0 0.00 4 8.16 19
.....................................GGGTCCCCGCGTCGTCC........................................................ read_159579_0_0_0_3_1_0 MATURE 4 7.41 0 0.00 4 8.16 17
.................................GGCGGGGTCCCCGCGTCGTCC........................................................ read_361076_0_0_0_1_1_1 MATURE 3 5.56 0 0.00 3 6.12 21
................................CGGCGGGGTCCCCGCGTCGTC......................................................... read_176825_0_2_0_1_0_0 MATURE 3 5.56 2 40.00 1 2.04 21
...............................TCGGCGGGGTCCCCGCGTCGT.......................................................... read_333322_0_0_0_1_2_0 MATURE 3 5.56 0 0.00 3 6.12 21
..............................CTCGGCGGGGTCCCCGC............................................................... read_73051_0_0_0_2_0_0 MATURE 2 3.70 0 0.00 2 4.08 17
.................................GGCGGGGTCCCCGCGTCGT.......................................................... read_35010_0_0_0_1_0_1 MATURE 2 3.70 0 0.00 2 4.08 19
.............................GCTCGGCGGGGTCCCCGCGT............................................................. read_46558_0_1_0_1_0_0 MATURE 2 3.70 1 20.00 1 2.04 20
.........................CCCCGCTCGGCGGGGTC.................................................................... read_231269_0_0_0_1_0_1 MATURE 2 3.70 0 0.00 2 4.08 17
...............................TCGGCGGGGTCCCCGCGTCGTCC........................................................ read_127183_0_0_0_1_1_0 MATURE 2 3.70 0 0.00 2 4.08 23
................................CGGCGGGGTCCCCGCGTCGTCC........................................................ read_343263_0_0_0_1_0_1 MATURE 2 3.70 0 0.00 2 4.08 22
................................CGGCGGGGTCCCCGCGTCGT.......................................................... read_318412_0_0_0_0_1_0 MATURE 1 1.85 0 0.00 1 2.04 20
....................................GGGGTCCCCGCGTCGTCCCa...................................................... read_300079_0_0_0_0_0_1 MATURE 1 1.85 0 0.00 1 2.04 a 19
.................................GGCGGGGTCCCCGCGTCGTCCC....................................................... read_392797_0_0_0_0_0_1 MATURE 1 1.85 0 0.00 1 2.04 22
.............GTCCCCGTCCGTCCCCGCTC............................................................................. read_264214_0_0_0_0_1_0 MATURE 1 1.85 0 0.00 1 2.04 20
...........GGGTCCCCGTCCGTCCCCGCTCGG........................................................................... read_329945_0_0_0_1_0_0 MATURE 1 1.85 0 0.00 1 2.04 24
...................GTCCGTCCCCGCTCGGC.......................................................................... read_193453_0_0_0_0_0_1 MATURE 1 1.85 0 0.00 1 2.04 17
..................................GCGGGGTCCCCGCGTCGTCCC....................................................... read_61487_0_0_0_0_0_1 MATURE 1 1.85 0 0.00 1 2.04 21
...........GGGTCCCCGTCCGTCCC.................................................................................. read_32790_0_0_0_0_0_1 MATURE 1 1.85 0 0.00 1 2.04 17
.............................GCTCGGCGGGGTCCCCGCGTC............................................................ read_258181_0_1_0_0_0_0 MATURE 1 1.85 1 20.00 0 0.00 21
...............................TCGGCGGGGTCCCtGCGTCGTC......................................................... read_406856_0_0_0_0_0_1 MATURE 1 1.85 0 0.00 1 2.04 13T8
............................CGCTCGGCGGGGTaCCCGCGT............................................................. read_166663_0_0_0_0_0_1 MATURE 1 1.85 0 0.00 1 2.04 13A7
...................GTCCGTCCCCGCTCGGCGGGG...................................................................... read_408620_0_0_0_0_1_0 MATURE 1 1.85 0 0.00 1 2.04 21
..........................CCCGCTCGGCGGGGTCC................................................................... read_252251_0_0_0_0_0_1 MATURE 1 1.85 0 0.00 1 2.04 17
...........................CCGCTCGGCGGGGTCCCCG................................................................ read_75786_0_0_0_0_0_1 MATURE 1 1.85 0 0.00 1 2.04 19
....................................GGGGTCCCCGCGTCGTCaCC...................................................... read_282404_0_0_0_0_1_0 MATURE 1 1.85 0 0.00 1 2.04 17A2
.............................GCTCGGCGGGGTCCCCGCGTCG........................................................... read_157088_0_0_1_0_0_0 MATURE 1 1.85 1 20.00 0 0.00 22
---------- ---------- ----------
54 5 49
(9.26) (90.74)
*** OTHER ***
_____________________________________________________________________________________________________________
CCCGGATAGCCGGGTCCCCGTCCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCCCCGCGGCGGCGCGGGGTCTCCCCCCGCCGGGCGTCGGGACCGGGGTCCGGTGCGG REF 16 11144133 - 11144241
CGTCCCCGCTCGGCGGGGTCC MATURE 16 11144156 - 11144284 mmu-miR-689 +
_____________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
................................................................................CCGGGCGTCGGGACCGGGG........... read_224916_0_0_0_2_1_1 OTHER 4 8.16 0 0.00 4 9.52 19
...................................................................................GGCGTCGGGACCGGGGTC......... read_268438_0_0_0_2_1_1 OTHER 4 8.16 0 0.00 4 9.52 18
............................................................................CCCGCCGGGCGTCGGGACC............... read_293211_0_0_0_1_1_0 OTHER 2 4.08 0 0.00 2 4.76 19
.....ATAGCCGGGTCCCCGTC........................................................................................ read_325898_1_0_0_0_0_1 OTHER 2 4.08 1 14.29 1 2.38 17
....GATAGCCGGGTCCCCGT......................................................................................... read_20150_1_0_0_1_0_0 OTHER 2 4.08 1 14.29 1 2.38 17
................................................................................CCGGGCGTCGGGACCGGGGT.......... read_339585_0_0_0_1_0_1 OTHER 2 4.08 0 0.00 2 4.76 20
............................................................................CCCGCCGGGCGTCGGGACCG.............. read_390054_0_0_0_1_1_0 OTHER 2 4.08 0 0.00 2 4.76 20
...................................................................................GGCGTCGGGACCGGGGT.......... read_37032_0_0_0_0_0_1 OTHER 1 2.04 0 0.00 1 2.38 17
......................................GGTCCCCGCGTCGTCCC....................................................... read_359137_0_0_1_0_0_0 OTHER 1 2.04 1 14.29 0 0.00 17
.......................................GTCCCCtCGTCGTCCCCGCG................................................... read_348039_0_0_0_0_1_0 OTHER 1 2.04 0 0.00 1 2.38 6T13
....................................................................GGTCTCCCCCCGCCGGGCGT...................... read_243662_0_0_0_1_0_0 OTHER 1 2.04 0 0.00 1 2.38 20
...............................................................................GCCGGGCGTCGGGACCGGGGgc......... read_240124_0_0_0_0_1_0 OTHER 1 2.04 0 0.00 1 2.38 gc 20
................................................................................CCGGGCGTCGGGACCGGG............ read_299194_0_0_0_0_0_1 OTHER 1 2.04 0 0.00 1 2.38 18
.......AGCCGGGTCCCCGTCCG...................................................................................... read_214810_0_0_0_0_1_0 OTHER 1 2.04 0 0.00 1 2.38 17
...............................................................................GCCGGGCGTCGGGACCGGGGTCCGGT..... read_292213_0_0_0_0_1_0 OTHER 1 2.04 0 0.00 1 2.38 26
............................................................................CCCGCCGGGCGTCGGGcCCGGGGc.......... read_230635_1_0_0_0_0_0 OTHER 1 2.04 1 14.29 0 0.00 c 16C6
................................................................................CCGGGCGTCGGGACCGGGGTCgg....... read_150483_0_0_0_1_0_0 OTHER 1 2.04 0 0.00 1 2.38 gg 21
.......AGCCGGGTCCCCGTCCGTCCC.................................................................................. read_290875_1_0_0_0_0_0 OTHER 1 2.04 1 14.29 0 0.00 21
.............................................GCGTCGTCCCCGCGGCGG............................................... read_257799_0_0_0_0_1_0 OTHER 1 2.04 0 0.00 1 2.38 18
..............................................................................CGCCGGGCGTCGGGACC............... read_373782_0_0_0_0_1_0 OTHER 1 2.04 0 0.00 1 2.38 17
.............................................................................CCGCCGGGCGTCGGGACC............... read_306106_0_0_0_1_0_0 OTHER 1 2.04 0 0.00 1 2.38 18
..................................................................GGGGTCTCCCCCCGCCGGGCGT...................... read_256358_0_0_0_0_0_1 OTHER 1 2.04 0 0.00 1 2.38 22
................................................................................CCGGGCGTCGGGACCGGGGg.......... read_53826_0_0_0_1_0_0 OTHER 1 2.04 0 0.00 1 2.38 g 19
CCCGGATAGCCGGGTCCCCGTCC....................................................................................... read_225358_0_1_0_0_0_0 OTHER 1 2.04 1 14.29 0 0.00 23
...............................................................................GCCGGGCGTCGGGACCGGGGT.......... read_301647_0_0_0_0_0_1 OTHER 1 2.04 0 0.00 1 2.38 21
.........................................CCCCGCGTCGTCCCCGCGGCG................................................ read_8072_0_0_0_1_0_0 OTHER 1 2.04 0 0.00 1 2.38 21
......................................................................................GTCGGGACCGGGGTCCGGTGC... read_165105_0_0_0_1_0_0 OTHER 1 2.04 0 0.00 1 2.38 21
...............................................................................GCCGGGCGTCGGGACCGGGG........... read_304179_0_0_0_1_0_0 OTHER 1 2.04 0 0.00 1 2.38 20
................................................................................CCGGGCGTCGGGACCGGGGTC......... read_16650_0_0_0_1_0_0 OTHER 1 2.04 0 0.00 1 2.38 21
................................................................................CCGGGCGTCGGGACCGG............. read_66873_0_0_0_1_0_0 OTHER 1 2.04 0 0.00 1 2.38 17
......................................................................................GTCGGGACCGGGGTCCGGTGCGG. read_150792_0_0_0_0_1_0 OTHER 1 2.04 0 0.00 1 2.38 23
.....ATAGCCGGGTCCCCGTCCct..................................................................................... read_225164_0_0_0_1_0_0 OTHER 1 2.04 0 0.00 1 2.38 ct 18
.........................................................................................GGGACCGGGGTCCGGTGCG.. read_274222_0_0_0_0_0_1 OTHER 1 2.04 0 0.00 1 2.38 19
...................................................................................GGCGTCGGGACCGGGGTCtg....... read_352796_0_0_0_0_1_0 OTHER 1 2.04 0 0.00 1 2.38 tg 18
..................................................................................GGGCGTCGGGACCGGGG........... read_234657_1_0_0_0_0_0 OTHER 1 2.04 1 14.29 0 0.00 17
.....ATAGCCGGGTCCCCGTCC....................................................................................... read_153492_0_0_0_1_0_0 OTHER 1 2.04 0 0.00 1 2.38 18
....GATAGCCGGGTCCCCGTC........................................................................................ read_90400_0_0_0_0_1_0 OTHER 1 2.04 0 0.00 1 2.38 18
..CGGATAGCCGGcTCCCCGTCCG...................................................................................... read_159854_0_0_0_0_1_0 OTHER 1 2.04 0 0.00 1 2.38 11C10
---------- ---------- ----------
49 7 42
(14.29) (85.71)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 5 49 54 52.43%
OTHER 7 42 49 47.57%
---------- ---------- ----------
12 91 103
[END]