[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-669o
DESCRIPTION : mmu-mir-669o MI0009945 Mus musculus miR-669o stem-loop
CHROMOSOME : 2
SPAN : 10435927 - 10436022
LENGTH : 96
SEQUENCE : TGCATGTGCATGTGTGTATAGTTGTGTGTGCATGTTTATGTGTGTATTTGAATATACATAACATACACACACACGTATAAACACAAGCACACACAC
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-669o
ACCID : MI0009945
PARENT : mmu-mir-669o
CHROMOSOME : 2
START : 10435927
STOP : 10436022
OFFSET : 19..41
SEQUENCE : TAGTTGTGTGTGCATGTTTATGT
STRAND : +
******************************
*** MATURE ***
________________________________________________________________________________________________
TGCATGTGCATGTGTGTATAGTTGTGTGTGCATGTTTATGTGTGTATTTGAATATACATAACATACACACACACGTATAAACACAAGCACACACAC REF 2 10435927 - 10436022
TAGTTGTGTGTGCATGTTTATGT MATURE 2 10435946 - 10436063 mmu-miR-669o +
________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...................AGTTGTGTGTGCATGTTTATGT........................................................ read_213743_1_1_0_1_1_2 MATURE 6 100.00 2 100.00 4 100.00 22
---------- ---------- ----------
6 2 4
(33.33) (66.67)
*** OTHER ***
________________________________________________________________________________________________
TGCATGTGCATGTGTGTATAGTTGTGTGTGCATGTTTATGTGTGTATTTGAATATACATAACATACACACACACGTATAAACACAAGCACACACAC REF 2 10435927 - 10436022
TAGTTGTGTGTGCATGTTTATGT MATURE 2 10435946 - 10436063 mmu-miR-669o +
________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
........................................................CATAACATACACACACACGT..................... read_45746_5_3_8_4_5_3 OTHER 28 41.18 16 35.56 12 52.17 20
........................................................CATAACATACACACACACGTA.................... read_116243_3_6_5_1_2_1 OTHER 18 26.47 14 31.11 4 17.39 21
........................................................CATAACATACACACACACGTAT................... read_5970_4_2_2_2_1_0 OTHER 11 16.18 8 17.78 3 13.04 22
.........................................................ATAACATACACACACACGTAT................... read_323986_1_1_1_0_1_0 OTHER 4 5.88 3 6.67 1 4.35 21
........................................................aATAACATACACACACACGTAT................... read_307918_1_0_0_0_0_0 OTHER 1 1.47 1 2.22 0 0.00 21
........................................................CATAACATACACACACACGTt.................... read_281813_0_1_0_0_0_0 OTHER 1 1.47 1 2.22 0 0.00 t 20
........................................................CATAACATACACACACACGa..................... read_270550_0_0_0_0_1_0 OTHER 1 1.47 0 0.00 1 4.35 a 19
.........................................................ATAACATACACACACACGT..................... read_126660_0_0_0_0_0_1 OTHER 1 1.47 0 0.00 1 4.35 19
........................................................CATAACATACACACACACGTAc................... read_410315_0_0_0_0_1_0 OTHER 1 1.47 0 0.00 1 4.35 c 21
........................................................aATAACATACACACACACGTA.................... read_176526_0_1_0_0_0_0 OTHER 1 1.47 1 2.22 0 0.00 20
.........................................................ATAACATACACACACACGTA.................... read_214687_0_1_0_0_0_0 OTHER 1 1.47 1 2.22 0 0.00 20
---------- ---------- ----------
68 45 23
(66.18) (33.82)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 2 4 6 8.11%
OTHER 45 23 68 91.89%
---------- ---------- ----------
47 27 74
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