[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************************************************************
ID : mmu-mir-669f
DESCRIPTION : mmu-mir-669f MI0006287 Mus musculus miR-669f stem-loop
CHROMOSOME : 2
SPAN : 10388856 - 10388976
LENGTH : 121
SEQUENCE : TGTATGTGCCTGTGTGTATAGTTGTGTGTGCATGTGCATGTGTGTATATGAATATACATATACATACACACACACGTATAAACGCAAGCACAAACACACACAGAGGAATGGCACTCGTTGA
OVERHANG THRESHOLD : 75%
**********************************************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-669f
ACCID : MI0006287
PARENT : mmu-mir-669f
CHROMOSOME : 2
START : 10388856
STOP : 10388976
OFFSET : 57..79
SEQUENCE : CATATACATACACACACACGTAT
STRAND : +
******************************
*** MATURE ***
_________________________________________________________________________________________________________________________
TGTATGTGCCTGTGTGTATAGTTGTGTGTGCATGTGCATGTGTGTATATGAATATACATATACATACACACACACGTATAAACGCAAGCACAAACACACACAGAGGAATGGCACTCGTTGA REF 2 10388856 - 10388976
CATATACATACACACACACGTAT MATURE 2 10388913 - 10389055 mmu-miR-669f +
_________________________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.........................................................ATATACATACACACACACGTA............................................ read_113615_1_0_0_0_0_0 MATURE 1 33.33 1 33.33 0 0 21
.........................................................ATATACATACACACACACGTAT........................................... read_119118_0_1_0_0_0_0 MATURE 1 33.33 1 33.33 0 0 22
.........................................................ATATACATACACACACACGT............................................. read_286498_0_1_0_0_0_0 MATURE 1 33.33 1 33.33 0 0 20
---------- ---------- ----------
3 3 0
(100.00) (0.00)
*** OTHER ***
_________________________________________________________________________________________________________________________
TGTATGTGCCTGTGTGTATAGTTGTGTGTGCATGTGCATGTGTGTATATGAATATACATATACATACACACACACGTATAAACGCAAGCACAAACACACACAGAGGAATGGCACTCGTTGA REF 2 10388856 - 10388976
CATATACATACACACACACGTAT MATURE 2 10388913 - 10389055 mmu-miR-669f +
_________________________________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.........................GTGTGCATGTGCATGTGTGT............................................................................. read_209036_1_1_0_1_0_0 OTHER 3 75.00 2 66.67 1 100.00 20
.........................GTGTGCATGTGCATGTGTGTAT........................................................................... read_378002_1_0_0_0_0_0 OTHER 1 25.00 1 33.33 0 0.00 22
---------- ---------- ----------
4 3 1
(75.00) (25.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 3 0 3 42.86%
OTHER 3 1 4 57.14%
---------- ---------- ----------
6 1 7
[END]