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REFERENCE HAIRPIN
**********************************************************************************************************************************************
ID                 : mmu-mir-669d
DESCRIPTION        : mmu-mir-669d MI0006281 Mus musculus miR-669d stem-loop
CHROMOSOME         : 2
SPAN               : 10389970 - 10390090
LENGTH             : 121
SEQUENCE           : CAGCCCGGGATTTGTGTGTTGCTTGCTCTATATGTGTGTATACTTGTGTGTGCATGTATATGTGTGTATATGAATATACATATACATACACACCCATATACACACGCATGCATGCACACAC
OVERHANG THRESHOLD : 75%
**********************************************************************************************************************************************


TARGET
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CATEGORY   : MATURE
ID         : mmu-miR-669d
ACCID      : MI0006281
PARENT     : mmu-mir-669d
CHROMOSOME : 2
START      : 10389970
STOP       : 10390090
OFFSET     : 42..63
SEQUENCE   : ACTTGTGTGTGCATGTATATGT
STRAND     : +
******************************



*** MATURE ***
_________________________________________________________________________________________________________________________
CAGCCCGGGATTTGTGTGTTGCTTGCTCTATATGTGTGTATACTTGTGTGTGCATGTATATGTGTGTATATGAATATACATATACATACACACCCATATACACACGCATGCATGCACACAC REF                  2                    10389970 - 10390090  
                                         ACTTGTGTGTGCATGTATATGT                                                           MATURE               2                    10390012 - 10390153  mmu-miR-669d         +                    
_________________________________________________________________________________________________________________________

                                                                                                                     -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
..........................................CTTGTGTGTGCATGTATATG............................................................   read_388802_0_1_0_0_0_0       MATURE            1        25.00            1       100.00            0         0.00                        20   
..........................................CTTGTGTGTGCATGTATATGTaa.........................................................   read_216036_0_0_0_0_0_1       MATURE            1        25.00            0         0.00            1        33.33           aa           21   
.........................................ACTTGTGTGTGCATGTATAT.............................................................   read_340258_0_0_0_0_0_1       MATURE            1        25.00            0         0.00            1        33.33                        20   
..........................................CTTGTGTGTGCATGTATAT.............................................................   read_372834_0_0_0_0_0_1       MATURE            1        25.00            0         0.00            1        33.33                        19   
                                                                                                                                                                    ----------                ----------                ----------   
                                                                                                                                                                             4                         1                         3                                          
                                                                                                                                                                                                 (25.00)                   (75.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               1               3               4         100.00%
                     ----------      ----------      ----------                
                              1               3               4                



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