[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-669a-2
DESCRIPTION : mmu-mir-669a-2 MI0004667 Mus musculus miR-669a-2 stem-loop
CHROMOSOME : 2
SPAN : 10431791 - 10431887
LENGTH : 97
SEQUENCE : CATGTATGTGCATGTGTGTATAGTTGTGTGTGCATGTTCATGTCTATATTTGAATATACATAACATACACACACACGTATAAACGCAAGCACACACA
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-669a
ACCID : MI0004667
PARENT : mmu-mir-669a-2
CHROMOSOME : 2
START : 10431791
STOP : 10431887
OFFSET : 22..43
SEQUENCE : AGTTGTGTGTGCATGTTCATGT
STRAND : +
******************************
*** MATURE ***
_________________________________________________________________________________________________
CATGTATGTGCATGTGTGTATAGTTGTGTGTGCATGTTCATGTCTATATTTGAATATACATAACATACACACACACGTATAAACGCAAGCACACACA REF 2 10431791 - 10431887
AGTTGTGTGTGCATGTTCATGT MATURE 2 10431813 - 10431930 mmu-miR-669a +
_________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.....................AGTTGTGTGTGCATGTTCATGT....................................................... read_197262_0_1_0_0_0_0 MATURE 1 100.00 1 100.00 0 0 22
---------- ---------- ----------
1 1 0
(100.00) (0.00)
*** OTHER ***
_________________________________________________________________________________________________
CATGTATGTGCATGTGTGTATAGTTGTGTGTGCATGTTCATGTCTATATTTGAATATACATAACATACACACACACGTATAAACGCAAGCACACACA REF 2 10431791 - 10431887
AGTTGTGTGTGCATGTTCATGT MATURE 2 10431813 - 10431930 mmu-miR-669a +
_________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..........................................................CATAACATACACACACACGT.................... read_45746_5_3_8_4_5_3 OTHER 28 41.18 16 35.56 12 52.17 20
..........................................................CATAACATACACACACACGTA................... read_116243_3_6_5_1_2_1 OTHER 18 26.47 14 31.11 4 17.39 21
..........................................................CATAACATACACACACACGTAT.................. read_5970_4_2_2_2_1_0 OTHER 11 16.18 8 17.78 3 13.04 22
...........................................................ATAACATACACACACACGTAT.................. read_323986_1_1_1_0_1_0 OTHER 4 5.88 3 6.67 1 4.35 21
..........................................................aATAACATACACACACACGTAT.................. read_307918_1_0_0_0_0_0 OTHER 1 1.47 1 2.22 0 0.00 21
..........................................................CATAACATACACACACACGTt................... read_281813_0_1_0_0_0_0 OTHER 1 1.47 1 2.22 0 0.00 t 20
..........................................................CATAACATACACACACACGa.................... read_270550_0_0_0_0_1_0 OTHER 1 1.47 0 0.00 1 4.35 a 19
...........................................................ATAACATACACACACACGT.................... read_126660_0_0_0_0_0_1 OTHER 1 1.47 0 0.00 1 4.35 19
..........................................................CATAACATACACACACACGTAc.................. read_410315_0_0_0_0_1_0 OTHER 1 1.47 0 0.00 1 4.35 c 21
..........................................................aATAACATACACACACACGTA................... read_176526_0_1_0_0_0_0 OTHER 1 1.47 1 2.22 0 0.00 20
...........................................................ATAACATACACACACACGTA................... read_214687_0_1_0_0_0_0 OTHER 1 1.47 1 2.22 0 0.00 20
---------- ---------- ----------
68 45 23
(66.18) (33.82)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 1 0 1 1.45%
OTHER 45 23 68 98.55%
---------- ---------- ----------
46 23 69
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