[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-669a-1
DESCRIPTION : mmu-mir-669a-1 MI0004523 Mus musculus mir-669a-1 stem-loop
CHROMOSOME : 2
SPAN : 10433830 - 10433926
LENGTH : 97
SEQUENCE : TGTATGTGCATGTGTGTATAGTTGTGTGTGCATGTTCATGTCTATATTTGAATATACATAACATACACACACACGTATAAACGCAAGCACACATACA
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-669a
ACCID : MI0004523
PARENT : mmu-mir-669a-1
CHROMOSOME : 2
START : 10433830
STOP : 10433926
OFFSET : 20..41
SEQUENCE : AGTTGTGTGTGCATGTTCATGT
STRAND : +
******************************
*** MATURE ***
_________________________________________________________________________________________________
TGTATGTGCATGTGTGTATAGTTGTGTGTGCATGTTCATGTCTATATTTGAATATACATAACATACACACACACGTATAAACGCAAGCACACATACA REF 2 10433830 - 10433926
AGTTGTGTGTGCATGTTCATGT MATURE 2 10433850 - 10433967 mmu-miR-669a +
_________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...................AGTTGTGTGTGCATGTTCATGT......................................................... read_197262_0_1_0_0_0_0 MATURE 1 100.00 1 100.00 0 0 22
---------- ---------- ----------
1 1 0
(100.00) (0.00)
*** OTHER ***
_________________________________________________________________________________________________
TGTATGTGCATGTGTGTATAGTTGTGTGTGCATGTTCATGTCTATATTTGAATATACATAACATACACACACACGTATAAACGCAAGCACACATACA REF 2 10433830 - 10433926
AGTTGTGTGTGCATGTTCATGT MATURE 2 10433850 - 10433967 mmu-miR-669a +
_________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
........................................................CATAACATACACACACACGT...................... read_45746_5_3_8_4_5_3 OTHER 28 41.18 16 35.56 12 52.17 20
........................................................CATAACATACACACACACGTA..................... read_116243_3_6_5_1_2_1 OTHER 18 26.47 14 31.11 4 17.39 21
........................................................CATAACATACACACACACGTAT.................... read_5970_4_2_2_2_1_0 OTHER 11 16.18 8 17.78 3 13.04 22
.........................................................ATAACATACACACACACGTAT.................... read_323986_1_1_1_0_1_0 OTHER 4 5.88 3 6.67 1 4.35 21
........................................................aATAACATACACACACACGTAT.................... read_307918_1_0_0_0_0_0 OTHER 1 1.47 1 2.22 0 0.00 21
........................................................CATAACATACACACACACGTt..................... read_281813_0_1_0_0_0_0 OTHER 1 1.47 1 2.22 0 0.00 t 20
........................................................CATAACATACACACACACGa...................... read_270550_0_0_0_0_1_0 OTHER 1 1.47 0 0.00 1 4.35 a 19
.........................................................ATAACATACACACACACGT...................... read_126660_0_0_0_0_0_1 OTHER 1 1.47 0 0.00 1 4.35 19
........................................................CATAACATACACACACACGTAc.................... read_410315_0_0_0_0_1_0 OTHER 1 1.47 0 0.00 1 4.35 c 21
........................................................aATAACATACACACACACGTA..................... read_176526_0_1_0_0_0_0 OTHER 1 1.47 1 2.22 0 0.00 20
.........................................................ATAACATACACACACACGTA..................... read_214687_0_1_0_0_0_0 OTHER 1 1.47 1 2.22 0 0.00 20
---------- ---------- ----------
68 45 23
(66.18) (33.82)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 1 0 1 1.45%
OTHER 45 23 68 98.55%
---------- ---------- ----------
46 23 69
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