[BEGIN]
REFERENCE HAIRPIN
*********************************************************************************************************************
ID : mmu-mir-532
DESCRIPTION : mmu-mir-532 MI0003206 Mus musculus miR-532 stem-loop
CHROMOSOME : X
SPAN : 6825528 - 6825623
LENGTH : 96
SEQUENCE : CAGATTTGCTTTTTCTCTTCCATGCCTTGAGTGTAGGACCGTTGACATCTTAATTACCCTCCCACACCCAAGGCTTGCAGGAGAGCAAGCCTTCTC
OVERHANG THRESHOLD : 75%
*********************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-532-3p
ACCID : MI0003206
PARENT : mmu-mir-532
CHROMOSOME : X
START : 6825528
STOP : 6825623
OFFSET : 58..79
SEQUENCE : CCTCCCACACCCAAGGCTTGCA
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-532-5p
ACCID : MI0003206
PARENT : mmu-mir-532
CHROMOSOME : X
START : 6825528
STOP : 6825623
OFFSET : 21..42
SEQUENCE : CATGCCTTGAGTGTAGGACCGT
STRAND : -
******************************
*** MATURE-3P ***
________________________________________________________________________________________________
CAGATTTGCTTTTTCTCTTCCATGCCTTGAGTGTAGGACCGTTGACATCTTAATTACCCTCCCACACCCAAGGCTTGCAGGAGAGCAAGCCTTCTC REF X 6825528 - 6825623
CCTCCCACACCCAAGGCTTGCA MATURE-3P X 6825586 - 6825702 mmu-miR-532-3p -
CATGCCTTGAGTGTAGGACCGT MATURE-5P X 6825549 - 6825665 mmu-miR-532-5p -
________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..........................................................CTCCCACACCCAAGGCTTGC................... read_357460_19_22_9_13_15_9 MATURE-3P 87 39.73 50 40.98 37 38.14 20
..........................................................CTCCCACACCCAAGGCTTGCA.................. read_181689_11_13_8_12_11_12 MATURE-3P 67 30.59 32 26.23 35 36.08 21
..........................................................CTCCCACACCCAAGGCTTGCAt................. read_135408_4_7_1_2_2_1 MATURE-3P 17 7.76 12 9.84 5 5.15 t 21
..........................................................CTCCCACACCCAAGGCTTG.................... read_357173_1_1_0_3_1_4 MATURE-3P 10 4.57 2 1.64 8 8.25 19
..........................................................CTCCCACACCCAAGGCTTGCt.................. read_191704_2_1_0_0_0_1 MATURE-3P 4 1.83 3 2.46 1 1.03 t 20
..........................................................CTCCCACACCCAAGGCTTcc................... read_289204_1_0_1_0_0_1 MATURE-3P 3 1.37 2 1.64 1 1.03 cc 18
..........................................................CTCCCACACCCAAGGCTTGCAa................. read_133453_1_1_1_0_0_0 MATURE-3P 3 1.37 3 2.46 0 0.00 a 21
..........................................................CTCCCACACCCAAGGCTTGCAaa................ read_350758_0_2_0_0_0_0 MATURE-3P 2 0.91 2 1.64 0 0.00 aa 21
..........................................................CTCCCACACCCAAGaCTTGC................... read_370782_2_0_0_0_0_0 MATURE-3P 2 0.91 2 1.64 0 0.00 14A5
..........................................................CTCCCACACCCAAGGCTTGCAat................ read_152450_0_1_1_0_0_0 MATURE-3P 2 0.91 2 1.64 0 0.00 at 21
..........................................................CTCCCACACCCAAGGCTTGa................... read_269918_0_0_0_0_2_0 MATURE-3P 2 0.91 0 0.00 2 2.06 a 19
..........................................................CTCCCACACCCAAGGCTT..................... read_221670_1_0_0_0_0_1 MATURE-3P 2 0.91 1 0.82 1 1.03 18
..........................................................CTCCCACACCCAAtGCTTGCA.................. read_363956_0_0_1_0_0_0 MATURE-3P 1 0.46 1 0.82 0 0.00 13T7
..........................................................CTCCCACACCCAAGGtTTGC................... read_255490_0_0_0_1_0_0 MATURE-3P 1 0.46 0 0.00 1 1.03 15T4
............................................................CCCACACCCAAGGCTTGCA.................. read_231239_0_1_0_0_0_0 MATURE-3P 1 0.46 1 0.82 0 0.00 19
..........................................................CTCCCACACCCAAGGCTTGCtt................. read_179291_0_0_1_0_0_0 MATURE-3P 1 0.46 1 0.82 0 0.00 tt 20
..........................................................CTCCCACACCCAAGGCTTGCAtt................ read_313480_0_0_0_1_0_0 MATURE-3P 1 0.46 0 0.00 1 1.03 tt 21
..........................................................CTCCCACACCCAAGGCTTGCttt................ read_89178_0_1_0_0_0_0 MATURE-3P 1 0.46 1 0.82 0 0.00 ttt 20
..........................................................CTCCCACACCCAAGGCTTGt................... read_303879_0_0_0_0_0_1 MATURE-3P 1 0.46 0 0.00 1 1.03 t 19
..........................................................CTCCCACACCCAAGGCTTac................... read_348074_0_1_0_0_0_0 MATURE-3P 1 0.46 1 0.82 0 0.00 ac 18
..........................................................CTCCCtCACCCAAGGCTTGC................... read_45963_1_0_0_0_0_0 MATURE-3P 1 0.46 1 0.82 0 0.00 5T14
..........................................................CTCCCACACCCAAGGCTTGCAGc................ read_46837_0_0_0_0_0_1 MATURE-3P 1 0.46 0 0.00 1 1.03 c 22
..........................................................CTCCCACACCgAAGGCTTGC................... read_71525_0_0_1_0_0_0 MATURE-3P 1 0.46 1 0.82 0 0.00 10G9
..........................................................CTCCCACACCCAAGaCTTGCA.................. read_339875_1_0_0_0_0_0 MATURE-3P 1 0.46 1 0.82 0 0.00 14A6
..........................................................CTCCCACACCCAAGGCTTGCAag................ read_59138_0_0_0_0_1_0 MATURE-3P 1 0.46 0 0.00 1 1.03 ag 21
..........................................................CTCCCACACCCAAGGCTcGCA.................. read_296713_0_0_0_0_0_1 MATURE-3P 1 0.46 0 0.00 1 1.03 17C3
..........................................................CTCCCACACCCAAGGCTTtct.................. read_106261_0_1_0_0_0_0 MATURE-3P 1 0.46 1 0.82 0 0.00 tct 18
..........................................................CTCCCACACCCAAGGCTTGCAG................. read_187574_0_1_0_0_0_0 MATURE-3P 1 0.46 1 0.82 0 0.00 22
..........................................................aTCCCACACCCAAGGCTTGa................... read_3599_0_1_0_0_0_0 MATURE-3P 1 0.46 1 0.82 0 0.00 a 18
..........................................................CTCCCACACCCAAGGCTTtCA.................. read_84098_0_0_0_0_0_1 MATURE-3P 1 0.46 0 0.00 1 1.03 18T2
---------- ---------- ----------
219 122 97
(55.71) (44.29)
*** MATURE-5P ***
________________________________________________________________________________________________
CAGATTTGCTTTTTCTCTTCCATGCCTTGAGTGTAGGACCGTTGACATCTTAATTACCCTCCCACACCCAAGGCTTGCAGGAGAGCAAGCCTTCTC REF X 6825528 - 6825623
CCTCCCACACCCAAGGCTTGCA MATURE-3P X 6825586 - 6825702 mmu-miR-532-3p -
CATGCCTTGAGTGTAGGACCGT MATURE-5P X 6825549 - 6825665 mmu-miR-532-5p -
________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.....................ATGCCTTGAGTGTAGGACCGT....................................................... read_8900_106_115_78_33_41_50 MATURE-5P 423 55.22 299 55.47 124 54.63 21
.....................ATGCCTTGAGTGTAGGACCGTT...................................................... read_6036_29_28_21_10_8_6 MATURE-5P 102 13.32 78 14.47 24 10.57 22
.....................ATGCCTTGAGTGTAGGACCG........................................................ read_146272_8_10_4_2_8_4 MATURE-5P 36 4.70 22 4.08 14 6.17 20
.....................ATGCCTTGAGTGTAGGACCGa....................................................... read_343578_9_5_4_2_3_0 MATURE-5P 23 3.00 18 3.34 5 2.20 a 20
.....................ATGCCTTGAGTGTAGGACCGTa...................................................... read_233734_6_5_1_1_3_0 MATURE-5P 16 2.09 12 2.23 4 1.76 a 21
.....................ATGCCTTGAGTGTAGGACC......................................................... read_299385_4_4_5_0_1_1 MATURE-5P 15 1.96 13 2.41 2 0.88 19
.....................ATGCCTTGAGTGTAGGACCGTTt..................................................... read_4730_3_4_3_1_0_3 MATURE-5P 14 1.83 10 1.86 4 1.76 t 22
.....................ATGCCTTGAGTGTAGGAaCGT....................................................... read_279146_1_5_3_1_1_0 MATURE-5P 11 1.44 9 1.67 2 0.88 17A3
.....................ATGCCTTGAGTGTAGGACCGTaa..................................................... read_21338_2_0_3_2_2_0 MATURE-5P 9 1.17 5 0.93 4 1.76 aa 21
.........................CTTGAGTGTAGGACCGT....................................................... read_244064_0_0_0_1_3_3 MATURE-5P 7 0.91 0 0.00 7 3.08 17
.....................ATGCCTTGAGTGTAGGACaGT....................................................... read_40789_1_1_0_2_1_2 MATURE-5P 7 0.91 2 0.37 5 2.20 18A2
.....................ATGCCTTGAGTGTAGGA........................................................... read_277394_0_0_1_0_2_3 MATURE-5P 6 0.78 1 0.19 5 2.20 17
.....................ATGCCTTGAGTGTAGtACCGT....................................................... read_319676_2_1_2_0_0_0 MATURE-5P 5 0.65 5 0.93 0 0.00 15T5
.....................ATGCCTTGAGTGTAGGACtGT....................................................... read_165869_2_2_0_0_0_0 MATURE-5P 4 0.52 4 0.74 0 0.00 18T2
.....................ATGCCTTGAGTGTAGGACCGTg...................................................... read_128418_2_1_0_1_0_0 MATURE-5P 4 0.52 3 0.56 1 0.44 g 21
.....................ATGCCTTGAGTGTAGGACCGTat..................................................... read_327390_0_1_2_1_0_0 MATURE-5P 4 0.52 3 0.56 1 0.44 at 21
.....................ATGCtTTGAGTGTAGGACCGT....................................................... read_16351_2_0_0_0_0_1 MATURE-5P 3 0.39 2 0.37 1 0.44 4T16
....................CATGCCTTGAGTGTAGGACCGT....................................................... read_185509_1_0_1_0_0_1 MATURE-5P 3 0.39 2 0.37 1 0.44 22
.....................ATGCCTTGAGTGTAGGACCGat...................................................... read_120160_0_1_0_0_0_2 MATURE-5P 3 0.39 1 0.19 2 0.88 at 20
.....................ATGCCTTGAGTGTAGGAgCGT....................................................... read_127820_1_1_0_0_0_1 MATURE-5P 3 0.39 2 0.37 1 0.44 17G3
.....................ATGCCTTGAGTGTAcGACCGT....................................................... read_16589_3_0_0_0_0_0 MATURE-5P 3 0.39 3 0.56 0 0.00 14C6
.....................ATGCCTTGAGTGTAGGACCGTgt..................................................... read_45697_0_2_1_0_0_0 MATURE-5P 3 0.39 3 0.56 0 0.00 gt 21
.....................ATGCCTTGAGTGTAGGACa......................................................... read_238253_0_0_2_0_0_0 MATURE-5P 2 0.26 2 0.37 0 0.00 a 18
.....................ATGCCTTGAGTGTAGGACCGTc...................................................... read_376986_1_1_0_0_0_0 MATURE-5P 2 0.26 2 0.37 0 0.00 c 21
....................CATGCCTTGAGTGTAGGAaCGT....................................................... read_158642_0_0_0_2_0_0 MATURE-5P 2 0.26 0 0.00 2 0.88 18A3
.....................ATGCCTTGAGTGTAtGACCGT....................................................... read_184152_1_0_0_0_0_1 MATURE-5P 2 0.26 1 0.19 1 0.44 14T6
.....................ATGCCTTGAGTGTAGGACCGac...................................................... read_144028_0_1_1_0_0_0 MATURE-5P 2 0.26 2 0.37 0 0.00 ac 20
.....................ATGCCTTGAGTGTAGGACCGTaaa.................................................... read_279950_1_0_1_0_0_0 MATURE-5P 2 0.26 2 0.37 0 0.00 aaa 21
.....................ATGCCTTGAGTGTAGGACag........................................................ read_139315_1_0_0_0_1_0 MATURE-5P 2 0.26 1 0.19 1 0.44 ag 18
.....................ATGCCTTGAGTGTAGGACCat....................................................... read_246881_0_0_0_1_1_0 MATURE-5P 2 0.26 0 0.00 2 0.88 at 19
.....................ATGCCTTGAGTGTAGGcCCGT....................................................... read_376486_2_0_0_0_0_0 MATURE-5P 2 0.26 2 0.37 0 0.00 16C4
.....................ATGCCTTGAGTGTAGGAC.......................................................... read_192921_0_0_0_0_1_1 MATURE-5P 2 0.26 0 0.00 2 0.88 18
.....................ATGCCTTGAGTGTAGGAaCGTT...................................................... read_276212_0_0_2_0_0_0 MATURE-5P 2 0.26 2 0.37 0 0.00 17A4
.....................ATGCCTTGAGTGTAaGACCGT....................................................... read_365152_2_0_0_0_0_0 MATURE-5P 2 0.26 2 0.37 0 0.00 14A6
.....................ATGCCTTGAGTtTAGGACCGT....................................................... read_386371_0_0_0_0_0_2 MATURE-5P 2 0.26 0 0.00 2 0.88 11T9
.....................ATGCCTTGAGTGTAtGACCGTT...................................................... read_231231_1_0_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 14T7
.....................ATGCCTTGAGTGTAGGACCGTTa..................................................... read_188910_0_0_1_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 a 22
.....................ATGCCTTGAGTGTAGGACgGTT...................................................... read_137631_0_0_1_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 18G3
.....................ATGCCTTGAGcGTAGGACCGT....................................................... read_31393_0_0_0_0_0_1 MATURE-5P 1 0.13 0 0.00 1 0.44 10C10
.....................cTGCCTTGAGTGTAGGACCGc....................................................... read_397866_0_1_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 c 19
.....................ATGCCTTGAGTGTAGGACCGTatt.................................................... read_323291_1_0_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 att 21
.....................ATGCCTcGAGTGTAGGACCGT....................................................... read_102974_0_1_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 6C14
.....................cTGCCTTGAGTGTAGGACCGTT...................................................... read_308161_0_1_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 21
.....................ATGCCTTGAGTGTAGGACtGTa...................................................... read_358351_0_1_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 a 18T2
.....................ATGCCTTGAGTGTAGGACtGTaaa.................................................... read_224287_0_1_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 aaa 18T2
.......................GCCTTGAGTGTAGGACCGT....................................................... read_181007_0_0_0_1_0_0 MATURE-5P 1 0.13 0 0.00 1 0.44 19
.....................ATGCCTTGAGTGTAGGACt......................................................... read_390088_0_0_0_0_0_1 MATURE-5P 1 0.13 0 0.00 1 0.44 t 18
.....................gTGCCTTGAGTGTAGGACCGT....................................................... read_7506_0_0_0_0_0_1 MATURE-5P 1 0.13 0 0.00 1 0.44 20
.....................ATGCCTTGAGTGTAcGACCGTT...................................................... read_246363_0_0_1_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 14C7
.....................ATGCCTTGAGTGTAGGACtctt...................................................... read_218555_0_1_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 tctt 18
.........................CTTGAGTGTAGGACCGTT...................................................... read_96957_0_0_0_1_0_0 MATURE-5P 1 0.13 0 0.00 1 0.44 18
.....................ATGCCTTGAGTGTtGGACCG........................................................ read_334127_0_1_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 13T6
.....................ATGCCTTGAGTGTAGGAaCG........................................................ read_349289_1_0_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 17A2
.....................ATGCCTTGAGTGTAGGACtg........................................................ read_227657_0_1_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 tg 18
.....................ATGCCTTGAGTGTAGGACCGTaag.................................................... read_364523_0_0_0_1_0_0 MATURE-5P 1 0.13 0 0.00 1 0.44 aag 21
.....................ATGCCTTGAGTGTAGGACCaa....................................................... read_165040_0_1_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 aa 19
.....................ATGCCTTGcGTGTAGGACCGT....................................................... read_370847_1_0_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 8C12
.....................ATGCCTTGAGTGTAGGgCCGTTtt.................................................... read_24824_0_1_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 tt 16G5
.....................ATGCCTTGAGTGTAGGAtCGT....................................................... read_142128_0_0_1_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 17T3
.....................ATGCCTTGAGTtTAGGACCG........................................................ read_362622_0_0_1_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 11T8
.....................ATGCCTTGAGTGTAGGACCt........................................................ read_70481_0_0_0_0_1_0 MATURE-5P 1 0.13 0 0.00 1 0.44 t 19
.....................ATGCCTTGAGTGTAtGACCGTTa..................................................... read_265712_0_1_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 a 14T7
.....................ATGCCTTGAGTGcAGGACCGTT...................................................... read_48538_0_0_0_0_1_0 MATURE-5P 1 0.13 0 0.00 1 0.44 12C9
.....................ATGCCTTGAGTGTAGGACtGTT...................................................... read_103101_1_0_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 18T3
.....................ATGCCTTGAGTGTAGGACCGatt..................................................... read_141523_0_0_0_1_0_0 MATURE-5P 1 0.13 0 0.00 1 0.44 att 20
.....................ATGCCTTGAGTGTAGGAaCGTat..................................................... read_374765_1_0_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 at 17A3
.....................ATGCCTTGAGTGTAGGACCtTTt..................................................... read_51086_0_0_1_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 t 19T2
.....................ATGCCTTGAGTGTAGGACCGTTat.................................................... read_169882_0_1_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 at 22
.....................ATGCCTTGAGTGcAGGACCGT....................................................... read_89009_0_0_0_0_0_1 MATURE-5P 1 0.13 0 0.00 1 0.44 12C8
.....................ATGCCTTGAGTGTcGGACCGT....................................................... read_103674_0_0_1_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 13C7
....................CATGCCTTGAGTGTAGGACCGTT...................................................... read_11647_0_1_0_0_0_0 MATURE-5P 1 0.13 1 0.19 0 0.00 23
---------- ---------- ----------
766 539 227
(70.37) (29.63)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 122 97 219 22.23%
MATURE-5P 539 227 766 77.77%
---------- ---------- ----------
661 324 985
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