[BEGIN]
REFERENCE HAIRPIN
********************************************************************************************
ID : mmu-mir-503
DESCRIPTION : mmu-mir-503 MI0003538 Mus musculus miR-503 stem-loop
CHROMOSOME : X
SPAN : 50407161 - 50407231
LENGTH : 71
SEQUENCE : TGCCCTAGCAGCGGGAACAGTACTGCAGTGAGTGTTTGGTGCCCTGGAGTATTGTTTCCACTGCCTGGGTA
OVERHANG THRESHOLD : 75%
********************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-503
ACCID : MI0003538
PARENT : mmu-mir-503
CHROMOSOME : X
START : 50407161
STOP : 50407231
OFFSET : 6..28
SEQUENCE : TAGCAGCGGGAACAGTACTGCAG
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-503*
ACCID : MI0003538
PARENT : mmu-mir-503
CHROMOSOME : X
START : 50407161
STOP : 50407231
OFFSET : 47..68
SEQUENCE : GAGTATTGTTTCCACTGCCTGG
STRAND : -
******************************
*** MATURE ***
_______________________________________________________________________
TGCCCTAGCAGCGGGAACAGTACTGCAGTGAGTGTTTGGTGCCCTGGAGTATTGTTTCCACTGCCTGGGTA REF X 50407161 - 50407231
TAGCAGCGGGAACAGTACTGCAG MATURE X 50407167 - 50407259 mmu-miR-503 -
GAGTATTGTTTCCACTGCCTGG MATURESTAR X 50407208 - 50407299 mmu-miR-503* -
_______________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
......AGCAGCGGGAACAGTACTGCAG............................................ read_150588_26_35_24_9_11_8 MATURE 113 46.69 85 46.70 28 46.67 22
......AGCAGCGGGAACAGTACTGCAGT........................................... read_156925_11_8_8_1_2_4 MATURE 34 14.05 27 14.84 7 11.67 23
......AGCAGCGGGAACAGTACTGCA............................................. read_19934_6_2_4_3_2_2 MATURE 19 7.85 12 6.59 7 11.67 21
......AGCAGCGGGAACAGTACT................................................ read_309088_1_3_1_0_0_2 MATURE 7 2.89 5 2.75 2 3.33 18
......AGCAGCGGGAACAGTACTGC.............................................. read_274443_0_2_2_0_0_1 MATURE 5 2.07 4 2.20 1 1.67 20
......AGCAGCGGGAACAGTACTG............................................... read_116138_1_2_0_0_1_1 MATURE 5 2.07 3 1.65 2 3.33 19
......AGCAGCGGGAACAGcACTGCAG............................................ read_254337_3_2_0_0_0_0 MATURE 5 2.07 5 2.75 0 0.00 14C7
......AGCAGCGGGcACAGTACTGCAG............................................ read_139734_1_0_0_1_1_1 MATURE 4 1.65 1 0.55 3 5.00 9C12
......AGCAGCGGGAACAGaACTGCAG............................................ read_100208_1_2_1_0_0_0 MATURE 4 1.65 4 2.20 0 0.00 14A7
......AGCAGCGGGAACAGTACTGa.............................................. read_80162_0_2_1_1_0_0 MATURE 4 1.65 3 1.65 1 1.67 a 19
......AGCAGCGGGAACAGTAC................................................. read_26051_0_1_0_1_0_0 MATURE 2 0.83 1 0.55 1 1.67 17
......AGCAGCGGGAACAGTACTGCAt............................................ read_214322_1_0_1_0_0_0 MATURE 2 0.83 2 1.10 0 0.00 t 21
......AGCAGCGGGAACAGTACTaaa............................................. read_148334_0_0_1_1_0_0 MATURE 2 0.83 1 0.55 1 1.67 aaa 18
......AGCAGCGGGcACAGTACTGCA............................................. read_281257_1_0_0_0_0_1 MATURE 2 0.83 1 0.55 1 1.67 9C11
......AGCAGCGGGAACAGgACTGCAG............................................ read_31731_1_0_0_0_0_1 MATURE 2 0.83 1 0.55 1 1.67 14G7
......AGCAGCGGGAACAGTACTGCcg............................................ read_342955_0_0_0_0_0_1 MATURE 1 0.41 0 0.00 1 1.67 cg 20
......AGCAGCGGGAACAGTACTtaag............................................ read_339874_0_0_1_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 taag 18
......AGCAGCGGGAACAGTAaTGCAG............................................ read_311388_1_0_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 16A5
......AGCAGCGGGAACAaTACTGCAG............................................ read_197414_0_1_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 13A8
......AGCAGCGGGAACAGTACTGCcGTt.......................................... read_76432_1_0_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 t 20C2
......AGCAGCGGGAACAGTACTGCAtt........................................... read_386024_0_0_1_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 tt 21
......AGCAGCGGGAACAGTACTaaaa............................................ read_82559_1_0_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 aaaa 18
......AGCAGCGGGAACAGTACTGCgGT........................................... read_76416_0_1_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 20G2
......AGCAGCGaGAACAGTACTGCAG............................................ read_261497_0_1_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 7A14
......AGCAGCGGGAACAGTACTGtcg............................................ read_255068_1_0_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 tcg 19
......AGCAGCGGGAACAaTACTGCA............................................. read_344435_0_0_1_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 13A7
......AGCAGCGGGAACAGTACTtCAG............................................ read_131917_0_0_1_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 18T3
......AGCAGCGtGAACAGTACTGCAG............................................ read_301244_1_0_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 7T14
......AGCAGCGGGAACAGaACTGCAGT........................................... read_309617_1_0_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 14A8
..........GCGGGAACAGTACTGCAG............................................ read_394512_0_0_0_1_0_0 MATURE 1 0.41 0 0.00 1 1.67 18
......AGCAGCGGGAACAGTACTGCAGTa.......................................... read_347086_0_0_1_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 a 23
......cGCAGCGGGAACAGTACTGCAG............................................ read_208522_0_0_0_0_1_0 MATURE 1 0.41 0 0.00 1 1.67 21
...........CGGGAACAGTACTGCAG............................................ read_357233_0_0_1_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 17
......AGCAGCGGGAACAGTACTaa.............................................. read_155063_0_0_0_0_0_1 MATURE 1 0.41 0 0.00 1 1.67 aa 18
......AGCAGCGGGAACAGgACTGCAGT........................................... read_92986_1_0_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 14G8
......AGCAGCGGGAACAGTACTGCAGa........................................... read_368919_1_0_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 a 22
......AGCAGCGGGAACAGTACTGaAG............................................ read_405621_1_0_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 19A2
......AGCAGCGGGAACAtTACTGCAGT........................................... read_293361_0_0_1_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 13T9
......AGCAGCGGGAACAGTAaTGCAGa........................................... read_86403_1_0_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 a 16A5
..........GCGGGAACAGTACTGCAGT........................................... read_125418_1_0_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 19
......AGCAGCGGGAACAGTACTGCt............................................. read_368658_0_1_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 t 20
......AGCAGCGGGAACAGTACTGCAa............................................ read_218458_0_0_0_0_0_1 MATURE 1 0.41 0 0.00 1 1.67 a 21
......AGCAGCGGGAACAGcACTGCA............................................. read_10717_1_0_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 14C6
......AGCAGCGGGAACAGTACTGaa............................................. read_161424_0_1_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 aa 19
......AGCAGCGGGAACAGTACTGaaa............................................ read_107829_1_0_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 aaa 19
......AGCAGCGGGAACAGTACTGgAG............................................ read_371689_1_0_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 19G2
......AGCAGCGGGAACAGTACTGCAGTt.......................................... read_108521_1_0_0_0_0_0 MATURE 1 0.41 1 0.55 0 0.00 t 23
---------- ---------- ----------
242 182 60
(75.21) (24.79)
*** MATURESTAR ***
_______________________________________________________________________
TGCCCTAGCAGCGGGAACAGTACTGCAGTGAGTGTTTGGTGCCCTGGAGTATTGTTTCCACTGCCTGGGTA REF X 50407161 - 50407231
TAGCAGCGGGAACAGTACTGCAG MATURE X 50407167 - 50407259 mmu-miR-503 -
GAGTATTGTTTCCACTGCCTGG MATURESTAR X 50407208 - 50407299 mmu-miR-503* -
_______________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...............................................AGTATTGTTTCCACTGCCTGt.... read_412176_0_1_0_0_0_0 MATURESTAR 1 100.00 1 100.00 0 0 t 20
---------- ---------- ----------
1 1 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
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MATURE 182 60 242 99.59%
MATURESTAR 1 0 1 0.41%
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183 60 243
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