[BEGIN]
REFERENCE HAIRPIN
****************************************************************************************************
ID : mmu-mir-499
DESCRIPTION : mmu-mir-499 MI0004676 Mus musculus miR-499 stem-loop
CHROMOSOME : 2
SPAN : 155448616 - 155448694
LENGTH : 79
SEQUENCE : GGGTGGGCAGCTGTTAAGACTTGCAGTGATGTTTAGCTCCTCTGCATGTGAACATCACAGCAAGTCTGTGCTGCTGCCT
OVERHANG THRESHOLD : 75%
****************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-499
ACCID : MI0004676
PARENT : mmu-mir-499
CHROMOSOME : 2
START : 155448616
STOP : 155448694
OFFSET : 14..34
SEQUENCE : TTAAGACTTGCAGTGATGTTT
STRAND : +
******************************
*** MATURE ***
_______________________________________________________________________________
GGGTGGGCAGCTGTTAAGACTTGCAGTGATGTTTAGCTCCTCTGCATGTGAACATCACAGCAAGTCTGTGCTGCTGCCT REF 2 155448616 - 155448694
TTAAGACTTGCAGTGATGTTT MATURE 2 155448630 - 155448728 mmu-miR-499 +
_______________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..............TAAGACTTGCAGTGATGTTT.............................................. read_16668_4_3_0_0_0_0 MATURE 7 87.50 7 87.50 0 0 20
..............TAAGACTTGCAGTGATGTTTA............................................. read_104511_1_0_0_0_0_0 MATURE 1 12.50 1 12.50 0 0 21
---------- ---------- ----------
8 8 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 8 0 8 100.00%
---------- ---------- ----------
8 0 8
[END]