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REFERENCE HAIRPIN
**********************************************************************************************************
ID                 : mmu-mir-494
DESCRIPTION        : mmu-mir-494 MI0003532 Mus musculus miR-494 stem-loop
CHROMOSOME         : 12
SPAN               : 110953528 - 110953612
LENGTH             : 85
SEQUENCE           : TTGATACTTGAAGGAGAGGTTGTCCGTGTTGTCTTCTCTTTATTTATGATGAAACATACACGGGAAACCTCTTTTTTAGTATCAA
OVERHANG THRESHOLD : 75%
**********************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-494
ACCID      : MI0003532
PARENT     : mmu-mir-494
CHROMOSOME : 12
START      : 110953528
STOP       : 110953612
OFFSET     : 50..71
SEQUENCE   : TGAAACATACACGGGAAACCTC
STRAND     : +
******************************



*** MATURE ***
_____________________________________________________________________________________
TTGATACTTGAAGGAGAGGTTGTCCGTGTTGTCTTCTCTTTATTTATGATGAAACATACACGGGAAACCTCTTTTTTAGTATCAA REF                  12                   110953528 - 110953612 
                                                 TGAAACATACACGGGAAACCTC               MATURE               12                   110953578 - 110953683 mmu-miR-494          +                    
_____________________________________________________________________________________

                                                                                 -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
..................................................GAAACATACACGGGAAACCT................   read_299728_1_0_2_0_0_0       MATURE            3        60.00            3        75.00            0         0.00                        20   
..................................................GAAACATACACGGGAAAC..................    read_20275_0_0_0_0_1_0       MATURE            1        20.00            0         0.00            1       100.00                        18   
..................................................GAAACATACACGGGAAACC.................   read_334696_0_0_1_0_0_0       MATURE            1        20.00            1        25.00            0         0.00                        19   
                                                                                                                                ----------                ----------                ----------   
                                                                                                                                         5                         4                         1                                          
                                                                                                                                                             (80.00)                   (20.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               4               1               5         100.00%
                     ----------      ----------      ----------                
                              4               1               5                



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