[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************************
ID : mmu-mir-494
DESCRIPTION : mmu-mir-494 MI0003532 Mus musculus miR-494 stem-loop
CHROMOSOME : 12
SPAN : 110953528 - 110953612
LENGTH : 85
SEQUENCE : TTGATACTTGAAGGAGAGGTTGTCCGTGTTGTCTTCTCTTTATTTATGATGAAACATACACGGGAAACCTCTTTTTTAGTATCAA
OVERHANG THRESHOLD : 75%
**********************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-494
ACCID : MI0003532
PARENT : mmu-mir-494
CHROMOSOME : 12
START : 110953528
STOP : 110953612
OFFSET : 50..71
SEQUENCE : TGAAACATACACGGGAAACCTC
STRAND : +
******************************
*** MATURE ***
_____________________________________________________________________________________
TTGATACTTGAAGGAGAGGTTGTCCGTGTTGTCTTCTCTTTATTTATGATGAAACATACACGGGAAACCTCTTTTTTAGTATCAA REF 12 110953528 - 110953612
TGAAACATACACGGGAAACCTC MATURE 12 110953578 - 110953683 mmu-miR-494 +
_____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..................................................GAAACATACACGGGAAACCT................ read_299728_1_0_2_0_0_0 MATURE 3 60.00 3 75.00 0 0.00 20
..................................................GAAACATACACGGGAAAC.................. read_20275_0_0_0_0_1_0 MATURE 1 20.00 0 0.00 1 100.00 18
..................................................GAAACATACACGGGAAACC................. read_334696_0_0_1_0_0_0 MATURE 1 20.00 1 25.00 0 0.00 19
---------- ---------- ----------
5 4 1
(80.00) (20.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 4 1 5 100.00%
---------- ---------- ----------
4 1 5
[END]