[BEGIN]
REFERENCE HAIRPIN
**********************************************************************************************************
ID : mmu-mir-467d
DESCRIPTION : mmu-mir-467d MI0005513 Mus musculus miR-467d stem-loop
CHROMOSOME : 2
SPAN : 10429257 - 10429341
LENGTH : 85
SEQUENCE : CCTGTGTGCATAAGTGCGCGCATGTATATGCGTGTATATTTTATGCATATACATACACACACCTACACACACATGCACACAGACA
OVERHANG THRESHOLD : 75%
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TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-467d
ACCID : MI0005513
PARENT : mmu-mir-467d
CHROMOSOME : 2
START : 10429257
STOP : 10429341
OFFSET : 11..32
SEQUENCE : TAAGTGCGCGCATGTATATGCG
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-467d*
ACCID : MI0005513
PARENT : mmu-mir-467d
CHROMOSOME : 2
START : 10429257
STOP : 10429341
OFFSET : 47..68
SEQUENCE : ATATACATACACACACCTACAC
STRAND : +
******************************
*** MATURE ***
_____________________________________________________________________________________
CCTGTGTGCATAAGTGCGCGCATGTATATGCGTGTATATTTTATGCATATACATACACACACCTACACACACATGCACACAGACA REF 2 10429257 - 10429341
TAAGTGCGCGCATGTATATGCG MATURE 2 10429268 - 10429373 mmu-miR-467d +
ATATACATACACACACCTACAC MATURESTAR 2 10429304 - 10429409 mmu-miR-467d* +
_____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........AAGTGCGCGCATGTATATGCG...................................................... read_385726_4_5_7_2_1_3 MATURE 22 44.00 16 42.11 6 50.00 21
...........AAGTGCGCGCATGTATATGC....................................................... read_66990_2_1_5_1_0_1 MATURE 10 20.00 8 21.05 2 16.67 20
...........AAGTGCGCGCATGTATATGCGT..................................................... read_174154_1_2_1_0_0_2 MATURE 6 12.00 4 10.53 2 16.67 22
...........AAGTGCGCGCATGTATATGCGa..................................................... read_53208_0_1_2_0_0_1 MATURE 4 8.00 3 7.89 1 8.33 a 21
...........AAGTGCGCGCATGTATAT......................................................... read_223306_1_0_1_0_0_1 MATURE 3 6.00 2 5.26 1 8.33 18
...........AAGTGCGCGCATGTATATtc....................................................... read_405453_0_0_1_0_0_0 MATURE 1 2.00 1 2.63 0 0.00 tc 18
...........AAGTGCGCGCATGTATATG........................................................ read_150389_0_0_1_0_0_0 MATURE 1 2.00 1 2.63 0 0.00 19
..........TAAGTGCGCGCATGTATATGCG...................................................... read_403641_0_1_0_0_0_0 MATURE 1 2.00 1 2.63 0 0.00 22
...........AAGTGCGCGCATGTATATGgGT..................................................... read_227315_0_1_0_0_0_0 MATURE 1 2.00 1 2.63 0 0.00 19G2
...........AAGTGCGCGCATGTATATGCt...................................................... read_170435_0_1_0_0_0_0 MATURE 1 2.00 1 2.63 0 0.00 t 20
---------- ---------- ----------
50 38 12
(76.00) (24.00)
*** MATURESTAR ***
_____________________________________________________________________________________
CCTGTGTGCATAAGTGCGCGCATGTATATGCGTGTATATTTTATGCATATACATACACACACCTACACACACATGCACACAGACA REF 2 10429257 - 10429341
TAAGTGCGCGCATGTATATGCG MATURE 2 10429268 - 10429373 mmu-miR-467d +
ATATACATACACACACCTACAC MATURESTAR 2 10429304 - 10429409 mmu-miR-467d* +
_____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
................................................ATACATACACACACCTACAC.................. read_80419_1_0_0_0_0_0 MATURESTAR 1 100.00 1 100.00 0 0 20
---------- ---------- ----------
1 1 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 38 12 50 98.04%
MATURESTAR 1 0 1 1.96%
---------- ---------- ----------
39 12 51
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