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REFERENCE HAIRPIN
*******************************************************************************************************************
ID                 : mmu-mir-466f-3
DESCRIPTION        : mmu-mir-466f-3 MI0005509 Mus musculus miR-466f-3 stem-loop
CHROMOSOME         : 2
SPAN               : 10393580 - 10393673
LENGTH             : 94
SEQUENCE           : CATGTGTGTTTACGTGTGTGTGCATGTGCATGTGTGTATATGAATATATGTATACATACACACACACATACACACGCACGCAACACACACACAC
OVERHANG THRESHOLD : 75%
*******************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE-3P
ID         : mmu-miR-466f-3p
ACCID      : MI0005509
PARENT     : mmu-mir-466f-3
CHROMOSOME : 2
START      : 10393580
STOP       : 10393673
OFFSET     : 55..75
SEQUENCE   : CATACACACACACATACACAC
STRAND     : +
******************************


TARGET
******************************
CATEGORY   : MATURE-5P
ID         : mmu-miR-466f-5p
ACCID      : MI0005509
PARENT     : mmu-mir-466f-3
CHROMOSOME : 2
START      : 10393580
STOP       : 10393673
OFFSET     : 11..32
SEQUENCE   : TACGTGTGTGTGCATGTGCATG
STRAND     : +
******************************



*** MATURE-5P ***
______________________________________________________________________________________________
CATGTGTGTTTACGTGTGTGTGCATGTGCATGTGTGTATATGAATATATGTATACATACACACACACATACACACGCACGCAACACACACACAC REF                  2                    10393580 - 10393673  
                                                      CATACACACACACATACACAC                    MATURE-3P            2                    10393635 - 10393748  mmu-miR-466f-3p      +                    
          TACGTGTGTGTGCATGTGCATG                                                               MATURE-5P            2                    10393591 - 10393705  mmu-miR-466f-5p      +                    
______________________________________________________________________________________________

                                                                                          -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.................GTGTGCATGTGCATGTGTGT..........................................................   read_209036_1_1_0_1_0_0    MATURE-5P            3        60.00            2        50.00            1       100.00                        20   
.................GTGTGCATGTGCATGTGTGTAT........................................................   read_378002_1_0_0_0_0_0    MATURE-5P            1        20.00            1        25.00            0         0.00                        22   
............CGTGTGTGTGCATGTGCATGT..............................................................     read_7769_0_1_0_0_0_0    MATURE-5P            1        20.00            1        25.00            0         0.00                        21   
                                                                                                                                         ----------                ----------                ----------   
                                                                                                                                                  5                         4                         1                                          
                                                                                                                                                                      (80.00)                   (20.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
      MATURE-5P               4               1               5         100.00%
                     ----------      ----------      ----------                
                              4               1               5                



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