[BEGIN]
REFERENCE HAIRPIN
*******************************************************************************************************************
ID : mmu-mir-466f-3
DESCRIPTION : mmu-mir-466f-3 MI0005509 Mus musculus miR-466f-3 stem-loop
CHROMOSOME : 2
SPAN : 10393580 - 10393673
LENGTH : 94
SEQUENCE : CATGTGTGTTTACGTGTGTGTGCATGTGCATGTGTGTATATGAATATATGTATACATACACACACACATACACACGCACGCAACACACACACAC
OVERHANG THRESHOLD : 75%
*******************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-466f-3p
ACCID : MI0005509
PARENT : mmu-mir-466f-3
CHROMOSOME : 2
START : 10393580
STOP : 10393673
OFFSET : 55..75
SEQUENCE : CATACACACACACATACACAC
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-466f-5p
ACCID : MI0005509
PARENT : mmu-mir-466f-3
CHROMOSOME : 2
START : 10393580
STOP : 10393673
OFFSET : 11..32
SEQUENCE : TACGTGTGTGTGCATGTGCATG
STRAND : +
******************************
*** MATURE-5P ***
______________________________________________________________________________________________
CATGTGTGTTTACGTGTGTGTGCATGTGCATGTGTGTATATGAATATATGTATACATACACACACACATACACACGCACGCAACACACACACAC REF 2 10393580 - 10393673
CATACACACACACATACACAC MATURE-3P 2 10393635 - 10393748 mmu-miR-466f-3p +
TACGTGTGTGTGCATGTGCATG MATURE-5P 2 10393591 - 10393705 mmu-miR-466f-5p +
______________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.................GTGTGCATGTGCATGTGTGT.......................................................... read_209036_1_1_0_1_0_0 MATURE-5P 3 60.00 2 50.00 1 100.00 20
.................GTGTGCATGTGCATGTGTGTAT........................................................ read_378002_1_0_0_0_0_0 MATURE-5P 1 20.00 1 25.00 0 0.00 22
............CGTGTGTGTGCATGTGCATGT.............................................................. read_7769_0_1_0_0_0_0 MATURE-5P 1 20.00 1 25.00 0 0.00 21
---------- ---------- ----------
5 4 1
(80.00) (20.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-5P 4 1 5 100.00%
---------- ---------- ----------
4 1 5
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