[BEGIN]
REFERENCE HAIRPIN
*******************************************************************************************************************
ID : mmu-mir-466f-2
DESCRIPTION : mmu-mir-466f-2 MI0005508 Mus musculus miR-466f-2 stem-loop
CHROMOSOME : 2
SPAN : 10390302 - 10390395
LENGTH : 94
SEQUENCE : AATGTGTGTTTACGTGTGTGTGCATGTGCATGTGTGTATATGAATATATGTATACATACACACACACATACACACTCATGTAACACACACACAC
OVERHANG THRESHOLD : 75%
*******************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-466f-3p
ACCID : MI0005508
PARENT : mmu-mir-466f-2
CHROMOSOME : 2
START : 10390302
STOP : 10390395
OFFSET : 55..75
SEQUENCE : CATACACACACACATACACAC
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-466f-5p
ACCID : MI0005508
PARENT : mmu-mir-466f-2
CHROMOSOME : 2
START : 10390302
STOP : 10390395
OFFSET : 11..32
SEQUENCE : TACGTGTGTGTGCATGTGCATG
STRAND : +
******************************
*** MATURE-3P ***
______________________________________________________________________________________________
AATGTGTGTTTACGTGTGTGTGCATGTGCATGTGTGTATATGAATATATGTATACATACACACACACATACACACTCATGTAACACACACACAC REF 2 10390302 - 10390395
CATACACACACACATACACAC MATURE-3P 2 10390357 - 10390470 mmu-miR-466f-3p +
TACGTGTGTGTGCATGTGCATG MATURE-5P 2 10390313 - 10390427 mmu-miR-466f-5p +
______________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......................................................ATACACACACACATACACACT................... read_73090_0_0_0_0_0_1 MATURE-3P 1 100.00 0 0 1 100.00 21
---------- ---------- ----------
1 0 1
(0.00) (100.00)
*** MATURE-5P ***
______________________________________________________________________________________________
AATGTGTGTTTACGTGTGTGTGCATGTGCATGTGTGTATATGAATATATGTATACATACACACACACATACACACTCATGTAACACACACACAC REF 2 10390302 - 10390395
CATACACACACACATACACAC MATURE-3P 2 10390357 - 10390470 mmu-miR-466f-3p +
TACGTGTGTGTGCATGTGCATG MATURE-5P 2 10390313 - 10390427 mmu-miR-466f-5p +
______________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.................GTGTGCATGTGCATGTGTGT.......................................................... read_209036_1_1_0_1_0_0 MATURE-5P 3 60.00 2 50.00 1 100.00 20
.................GTGTGCATGTGCATGTGTGTAT........................................................ read_378002_1_0_0_0_0_0 MATURE-5P 1 20.00 1 25.00 0 0.00 22
............CGTGTGTGTGCATGTGCATGT.............................................................. read_7769_0_1_0_0_0_0 MATURE-5P 1 20.00 1 25.00 0 0.00 21
---------- ---------- ----------
5 4 1
(80.00) (20.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 0 1 1 16.67%
MATURE-5P 4 1 5 83.33%
---------- ---------- ----------
4 2 6
[END]