[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-466e
DESCRIPTION : mmu-mir-466e MI0005506 Mus musculus miR-466e stem-loop
CHROMOSOME : 2
SPAN : 10400715 - 10400798
LENGTH : 84
SEQUENCE : GTGTATGTGTTGATGTGTGTGTACATGTACATATGTGAATATGATATACATATACATACACGCACACATAAGACACATATGAGC
OVERHANG THRESHOLD : 75%
*********************************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-466e-3p
ACCID : MI0005506
PARENT : mmu-mir-466e
CHROMOSOME : 2
START : 10400715
STOP : 10400798
OFFSET : 51..73
SEQUENCE : TATACATACACGCACACATAAGA
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-466e-5p
ACCID : MI0005506
PARENT : mmu-mir-466e
CHROMOSOME : 2
START : 10400715
STOP : 10400798
OFFSET : 12..33
SEQUENCE : GATGTGTGTGTACATGTACATA
STRAND : +
******************************
*** MATURE-3P ***
____________________________________________________________________________________
GTGTATGTGTTGATGTGTGTGTACATGTACATATGTGAATATGATATACATATACATACACGCACACATAAGACACATATGAGC REF 2 10400715 - 10400798
TATACATACACGCACACATAAGA MATURE-3P 2 10400766 - 10400871 mmu-miR-466e-3p +
GATGTGTGTGTACATGTACATA MATURE-5P 2 10400727 - 10400831 mmu-miR-466e-5p +
____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...................................................ATACATACACGCACACATAAGA............ read_275954_2_1_0_0_0_0 MATURE-3P 3 30.00 3 37.50 0 0.00 22
...................................................ATACATACACGCACACAT................ read_126234_1_0_1_0_0_0 MATURE-3P 2 20.00 2 25.00 0 0.00 18
...................................................ATACATACACGCACACATAAG............. read_35929_0_0_1_0_0_1 MATURE-3P 2 20.00 1 12.50 1 50.00 21
...................................................ATACATACACGCACACATAA.............. read_309563_0_0_1_0_1_0 MATURE-3P 2 20.00 1 12.50 1 50.00 20
.....................................................ACATACACGCACACATAA.............. read_351745_0_0_1_0_0_0 MATURE-3P 1 10.00 1 12.50 0 0.00 18
---------- ---------- ----------
10 8 2
(80.00) (20.00)
*** MATURE-5P ***
____________________________________________________________________________________
GTGTATGTGTTGATGTGTGTGTACATGTACATATGTGAATATGATATACATATACATACACGCACACATAAGACACATATGAGC REF 2 10400715 - 10400798
TATACATACACGCACACATAAGA MATURE-3P 2 10400766 - 10400871 mmu-miR-466e-3p +
GATGTGTGTGTACATGTACATA MATURE-5P 2 10400727 - 10400831 mmu-miR-466e-5p +
____________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
............ATGTGTGTGTACATGTACATAT................................................... read_240317_1_0_0_0_0_0 MATURE-5P 1 50.00 1 50.00 0 0 22
............ATGTGTGTGTACATGTACA...................................................... read_378182_0_0_1_0_0_0 MATURE-5P 1 50.00 1 50.00 0 0 19
---------- ---------- ----------
2 2 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 8 2 10 83.33%
MATURE-5P 2 0 2 16.67%
---------- ---------- ----------
10 2 12
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